RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TNFRSF4P43489 277 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 ZFP36L2P47974 494 aaKnown RBP15.07■□□□□ 0
THUMPD3-210ENST00000515662 UFM1P61960 85 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 CST6Q15828 149 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.07■□□□□ 0
THUMPD3-210ENST00000515662 NEK5Q6P3R8 708 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 LAYNQ6UX15 382 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 MTSS1LQ765P7 747 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 RNF148Q8N7C7 305 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 PCYOX1LQ8NBM8 494 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 SLC26A7Q8TE54 656 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 TSPEARQ8WU66 669 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 PYCR2Q96C36 320 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 FARSBQ9NSD9 589 aaKnown RBP15.07■□□□□ 0
THUMPD3-210ENST00000515662 CLDND1Q9NY35 253 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 CROTQ9UKG9 612 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 ANGPTL2Q9UKU9 493 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 LRRC42Q9Y546 428 aa15.07■□□□□ 0
THUMPD3-210ENST00000515662 CCDC85CA6NKD9 419 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 K7EQS6 105 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ULK1O75385 1050 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 SLC22A3O75751 556 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 TAS2R38P59533 333 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 RCAN2Q14206 197 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 AP5B1Q2VPB7 878 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 AGBL4Q5VU57 503 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ANO7Q6IWH7 933 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 TRIM46Q7Z4K8 759 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 CACUL1Q86Y37 369 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 PYDC1Q8WXC3 89 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 EZH1Q92800 747 aaPredicted RBP15.06■□□□□ 0
THUMPD3-210ENST00000515662 FOXJ1Q92949 421 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 USP7Q93009 1102 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 PPP3R2Q96LZ3 170 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ZIM2Q9NZV7 527 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ATXN10Q9UBB4 475 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ZNF490Q9ULM2 529 aaPredicted RBP15.06■□□□□ 0
THUMPD3-210ENST00000515662 SLC28A1O00337 649 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 TRIM38O00635 465 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ANGPT2O15123 496 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 RGS14O43566 566 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 RNASEH1O60930 286 aaKnown RBP15.06■□□□□ 0
THUMPD3-210ENST00000515662 PDHA2P29803 388 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 MSX2P35548 267 aaPredicted RBP15.06■□□□□ 0
THUMPD3-210ENST00000515662 LTBRP36941 435 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 KIR2DL1P43626 348 aaPredicted RBP15.06■□□□□ 0
THUMPD3-210ENST00000515662 SEC13P55735 322 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 BLMHQ13867 455 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 RFTN2Q52LD8 501 aaPredicted RBP15.06■□□□□ 0
THUMPD3-210ENST00000515662 C2orf27AQ580R0 203 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 COQ5Q5HYK3 327 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 TRAPPC5Q8IUR0 188 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 HOMEZQ8IX15 550 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 TDHQ8IZJ6 230 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 PLA2G15Q8NCC3 412 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 HIPK4Q8NE63 616 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ATG10Q9H0Y0 220 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 SPAG4Q9NPE6 437 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 DNAJC11Q9NVH1 559 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 TMEM45AQ9NWC5 275 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 NMRK1Q9NWW6 199 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 ZNHIT2Q9UHR6 403 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 SLC22A14Q9Y267 594 aa15.06■□□□□ 0
THUMPD3-210ENST00000515662 NPC1O15118 1278 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 AP1G1O43747 822 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 CATP04040 527 aaKnown RBP15.05■□□□□ 0
THUMPD3-210ENST00000515662 MAPK9P45984 424 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 PFN3P60673 137 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 MS4A2Q01362 244 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 GGTA1PQ4G0N0 100 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 SGO1Q5FBB7 561 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.05■□□□□ 0
THUMPD3-210ENST00000515662 LRRC74BQ6ZQY2 392 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 KBTBD6Q86V97 674 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 ZNF547Q8IVP9 402 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 HIC2Q96JB3 615 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 ZNF514Q96K75 400 aaPredicted RBP15.05■□□□□ 0
THUMPD3-210ENST00000515662 GPATCH1Q9BRR8 931 aaKnown RBP15.05■□□□□ 0
THUMPD3-210ENST00000515662 BATF3Q9NR55 127 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 EPS15L1Q9UBC2 864 aa15.05■□□□□ 0
THUMPD3-210ENST00000515662 XIRP2A4UGR9 3374 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 MYO9BQ13459 2157 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 KCNE1BA0A087WTH5 132 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 A0A1W2PP18 115 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 IGLON5A6NGN9 336 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 LIN7AO14910 233 aaPredicted RBP15.05■□□□□ -0
THUMPD3-210ENST00000515662 VEGFDO43915 354 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 ADH1BP00325 375 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 ZNF8P17098 575 aaPredicted RBP15.05■□□□□ -0
THUMPD3-210ENST00000515662 C5AR1P21730 350 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 ITPKAP23677 461 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 TIE1P35590 1138 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 KCNK10P57789 538 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 HTR4Q13639 388 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 GTF2H3Q13889 308 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 CPSF6Q16630 551 aaKnown RBP eCLIP15.05■□□□□ -0
THUMPD3-210ENST00000515662 IL23RQ5VWK5 629 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 XKR5Q6UX68 686 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 ADAMTSL4Q6UY14 1074 aa15.05■□□□□ -0
THUMPD3-210ENST00000515662 CFAP206Q8IYR0 622 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms