RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 DPEP1P16444 411 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 TYMPP19971 482 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 NMBRP28336 390 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 HOXD13P35453 343 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 SLC15A1P46059 708 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 CDH11P55287 796 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 PPP2R2BQ00005 443 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 LGALS3BPQ08380 585 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 CHAF1BQ13112 559 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 KRT33BQ14525 404 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 IRF3Q14653 427 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 DUSP28Q4G0W2 176 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 RILPL1Q5EBL4 403 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 RAB41Q5JT25 222 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 ARHGEF16Q5VV41 709 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 FAM205BPQ63HN1 556 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 PWWP2BQ6NUJ5 590 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 MZT2BQ6NZ67 158 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF554Q86TJ5 538 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 TAGAPQ8N103 731 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 C17orf53Q8N3J3 647 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 CPSF7Q8N684 471 aaKnown RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 HSD17B8Q92506 261 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 SRSF8Q9BRL6 282 aaKnown RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 CABLES2Q9BTV7 478 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 ABHD6Q9BV23 337 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 SLC7A10Q9NS82 523 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 NPAP1Q9NZP6 1156 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 SUCLA2Q9P2R7 463 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 SPIN1Q9Y657 262 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 ERICH3Q5RHP9 1530 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 CFAP43Q8NDM7 1665 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 ASTN2O75129 1339 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 SOS1Q07889 1333 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 CROCCQ5TZA2 2017 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 IGHV4-4A0A075B6R2 117 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 DNM1LO00429 736 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 TO15178 435 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 RAF1P04049 648 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 CSH1P0DML2 217 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 CSH2P0DML3 217 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 PRLRP16471 622 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 SAT1P21673 171 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 GCH1P30793 250 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 PSMC4P43686 418 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 SNRPEP62304 92 aaKnown RBP3.41□□□□□ -1.86
LINC01088-211ENST00000515597 LMOD3Q0VAK6 560 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 PNRC1Q12796 327 aaPredicted RBP3.41□□□□□ -1.86
LINC01088-211ENST00000515597 GPR17Q13304 367 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 CUL4AQ13619 759 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 WTAPQ15007 396 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 RALBP1Q15311 655 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 TEAD2Q15562 447 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF613Q6PF04 617 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 SLC16A9Q7RTY1 509 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 SZRD1Q7Z422 152 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 P2RY8Q86VZ1 359 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF614Q8N883 585 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF383Q8NA42 475 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 OR2T6Q8NHC8 308 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 CEP295NLQ96MC4 621 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 MYADMQ96S97 322 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 RBM4BQ9BQ04 359 aaKnown RBP3.41□□□□□ -1.86
LINC01088-211ENST00000515597 RTN4RQ9BZR6 473 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 GHITMQ9H3K2 345 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 OSGEPL1Q9H4B0 414 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 HHATLQ9HCP6 504 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 CHMP1AQ9HD42 196 aaPredicted RBP3.41□□□□□ -1.86
LINC01088-211ENST00000515597 ACKR4Q9NPB9 350 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 PLCXD1Q9NUJ7 323 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 ARHGEF38Q9NXL2 777 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 NSMCE4AQ9NXX6 385 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 SEC63Q9UGP8 760 aaKnown RBP3.41□□□□□ -1.86
LINC01088-211ENST00000515597 EXOGQ9Y2C4 368 aaKnown RBP3.41□□□□□ -1.86
LINC01088-211ENST00000515597 PCDHGA5Q9Y5G8 931 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 PCNX3Q9H6A9 2034 aa3.41□□□□□ -1.86
LINC01088-211ENST00000515597 PRSS51A0A1B0GVH4 220 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 A0A1W2PN81 502 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 AGAP14A8MT82 685 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 E9PI62 339 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 CTDSP2O14595 271 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 ZNF197O14709 1029 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 ATP6V0E1O15342 81 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 RSL1D1O76021 490 aaKnown RBP3.4□□□□□ -1.87
LINC01088-211ENST00000515597 VPREB1P12018 145 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 MMP9P14780 707 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 CHRNA7P36544 502 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 ARSEP51690 589 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 SNX16P57768 344 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 SNRPD1P62314 119 aaKnown RBP3.4□□□□□ -1.87
LINC01088-211ENST00000515597 EPS8Q12929 822 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 PRKG2Q13237 762 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 MEA1Q16626 185 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 DCAF10Q5QP82 559 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 GRTP1Q5TC63 336 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 SPATA1Q5VX52 437 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 CORO6Q6QEF8 472 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 METTL7BQ6UX53 244 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 OR1J1Q8NGS3 322 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms