RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MARK2Q7KZI7 788 aaKnown RBP4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 CHST3Q7LGC8 479 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 CCDC186Q7Z3E2 898 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 SLFN11Q7Z7L1 901 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 CFAP206Q8IYR0 622 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 NPEPL1Q8NDH3 523 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 SSMEM1Q8WWF3 244 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 FCAMRQ8WWV6 532 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF653Q96CK0 615 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 ZMAT2Q96NC0 199 aaKnown RBP4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 MUS81Q96NY9 551 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 RTP3Q9BQQ7 232 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 ZCCHC17Q9NP64 241 aaKnown RBP4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 SERINC1Q9NRX5 453 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 FLT1P17948 1338 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 IKBKBO14920 756 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC22A2O15244 555 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC22A3O75751 556 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF432O94892 652 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 ATP5BP06576 529 aaKnown RBP4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 UMODP07911 640 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 CCDC175P0C221 793 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 PAX1P15863 534 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 MAPK12P53778 367 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 HYAL4Q2M3T9 481 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 SYT14P1Q58G82 188 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 SPDYCQ5MJ68 293 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 CCNYL2Q5T2Q4 361 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 ARMC3Q5W041 872 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 PLA2G4FQ68DD2 849 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 SUSD1Q6UWL2 747 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 ZBTB49Q6ZSB9 765 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 OR1J1Q8NGS3 322 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 ATL1Q8WXF7 558 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 IRGQQ8WZA9 623 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 HSD17B8Q92506 261 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 SYN2Q92777 582 aaPredicted RBP4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 DHX58Q96C10 678 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 LRRC3BQ96PB8 259 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 S1PR5Q9H228 398 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF334Q9HCZ1 680 aaPredicted RBP4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC7A7Q9UM01 511 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 ICAM5Q9UMF0 924 aa4.74□□□□□ -1.65
HMGCS1-207ENST00000514610 KIAA1210Q9ULL0 1709 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 FAM172BPA6NC97 362 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 NEMP2A6NFY4 417 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 RECQL5O94762 991 aaPredicted RBP4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 IGHV2-70P01814 119 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 GNAZP19086 355 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 CD22P20273 847 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 PTAFRP25105 342 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC6A6P31641 620 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 TIMP3P35625 211 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 LIMK1P53667 647 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 CDH11P55287 796 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 POLR2LP62875 67 aaKnown RBP4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 PRKCZQ05513 592 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 LGALS3BPQ08380 585 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 TNIP1Q15025 636 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 ZC2HC1CQ53FD0 456 aaPredicted RBP4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 KLHL22Q53GT1 634 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 KRT39Q6A163 491 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 MFSD12Q6NUT3 480 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC26A9Q7LBE3 791 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 MAML2Q8IZL2 1156 aaPredicted RBP4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 LMNTD1Q8N9Z9 388 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 CAMKVQ8NCB2 501 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 KIF18AQ8NI77 898 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 STAMBPL1Q96FJ0 436 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 OTUB1Q96FW1 271 aaPredicted RBP4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 SENP5Q96HI0 755 aaPredicted RBP4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF558Q96NG5 402 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 INPP4AQ96PE3 977 aaPredicted RBP4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 CPNE1Q99829 537 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC25A23Q9BV35 468 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 WWOXQ9NZC7 414 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 LIPGQ9Y5X9 500 aa4.73□□□□□ -1.65
HMGCS1-207ENST00000514610 WDR81Q562E7 1941 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 DUXAA6NLW8 204 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 RNASEH1O60930 286 aaKnown RBP4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 ACSL3O95573 720 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 HSPA4LO95757 839 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 IGHV4-38-2P0DP08 117 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 HAPLN1P10915 354 aaPredicted RBP4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 LIFP15018 202 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 ERCC2P18074 760 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 PPIGQ13427 754 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 CA9Q16790 459 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 DCAF10Q5QP82 559 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 ELFN2Q5R3F8 820 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 DET1Q7L5Y6 550 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 ARHGAP22Q7Z5H3 698 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF554Q86TJ5 538 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 TMEM139Q8IV31 216 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 DNAJC22Q8N4W6 341 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 PPFIBP2Q8ND30 876 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 OR11H4Q8NGC9 324 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 LRRC8CQ8TDW0 803 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms