RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PLCD3Q8N3E9 789 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 FBXW8Q8N3Y1 598 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 HDDC3Q8N4P3 179 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 OXR1Q8N573 874 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 CDYL2Q8N8U2 506 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 PCYOX1LQ8NBM8 494 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 OR2T11Q8NH01 316 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 OR56A3Q8NH54 315 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 HM13Q8TCT9 377 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 NAT14Q8WUY8 206 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 JADE3Q92613 823 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 RCN3Q96D15 328 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 METTL2AQ96IZ6 378 aaKnown RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 PPP3R2Q96LZ3 170 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 FOPNLQ96NB1 174 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 C1QTNF2Q9BXJ5 285 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 TEX101Q9BY14 249 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 MRPL1Q9BYD6 325 aaKnown RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 CD248Q9HCU0 757 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 SLC52A3Q9NQ40 469 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 DNAJC11Q9NVH1 559 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 GPRC5BQ9NZH0 403 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 ATXN10Q9UBB4 475 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 GULP1Q9UBP9 304 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 BTRCQ9Y297 605 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 COQ6Q9Y2Z9 468 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 UNC79Q9P2D8 2635 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 ATG2BQ96BY7 2078 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 ARHGEF33A8MVX0 844 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 MEI4A8MW99 385 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 H3BM21 787 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 K7ESM1 405 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PLK4O00444 970 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 MANBAO00462 879 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 FBP2O00757 339 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 AIM2O14862 343 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 LSM1O15116 133 aaKnown RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 INPP4BO15327 924 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 RGS14O43566 566 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PLRG1O43660 514 aaKnown RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 ENTPD5O75356 428 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PSMG1O95456 288 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 NPPAP01160 153 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 KRT6AP02538 564 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 KRT6BP04259 564 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 HOXC4P09017 264 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 MAP4P27816 1152 aaKnown RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 ACADLP28330 430 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 CASP2P42575 452 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 SOX9P48436 509 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 KRT6CP48668 564 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 NUDT2P50583 147 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PNLIPRP1P54315 467 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PFN3P60673 137 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 RPS21P63220 83 aaKnown RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 FOXM1Q08050 763 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 TBL3Q12788 808 aaKnown RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 ART3Q13508 389 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 KPNB1Q14974 876 aaKnown RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 AAK1Q2M2I8 961 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 WSCD2Q2TBF2 565 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PTCHD3Q3KNS1 767 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 FBXO43Q4G163 708 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 ATP6AP1LQ52LC2 224 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PIGGQ5H8A4 983 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 ZNF648Q5T619 568 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 C10orf62Q5T681 223 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 LIPJQ5W064 366 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 REP15Q6BDI9 236 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PRMT9Q6P2P2 845 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 BLOC1S3Q6QNY0 202 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 IL27RAQ6UWB1 636 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 BNC2Q6ZN30 1099 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 PRR23BQ6ZRT6 265 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 GK5Q6ZS86 529 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 USP30Q70CQ3 517 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 Q7L0L9 218 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 C11orf96Q7Z7L8 435 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 KBTBD6Q86V97 674 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 MYLK4Q86YV6 388 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 ZNF547Q8IVP9 402 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 FAM9CQ8IZT9 166 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 BEND7Q8N7W2 519 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 ST13P5Q8NFI4 369 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 WDR60Q8WVS4 1066 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 MARK4Q96L34 752 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 ANKRD27Q96NW4 1050 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 HOPXQ9BPY8 73 aaPredicted RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 OR2AG1Q9H205 316 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 RMI1Q9H9A7 625 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 WDR41Q9HAD4 459 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PREBQ9HCU5 417 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 CCDC167Q9P0B6 97 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 BCAP29Q9UHQ4 241 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 FZD4Q9ULV1 537 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 G3BP2Q9UN86 482 aaKnown RBP8.16□□□□□ -1.1
RNF4-220ENST00000513578 SNX6Q9UNH7 406 aa8.16□□□□□ -1.1
RNF4-220ENST00000513578 PTGDR2Q9Y5Y4 395 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms