RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PLSCR5A0PG75 271 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 HNRNPCL2B2RXH8 293 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 PROB1E7EW31 1015 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 ANKRD28O15084 1053 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 P4HA2O15460 535 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 CLDN14O95500 239 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 IGHDP01880 384 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 ZFYP08048 801 aaPredicted RBP4.11□□□□□ -1.75
HTT-210ENST00000512909 MX1P20591 662 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 CYP2B6P20813 491 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 ITGB8P26012 769 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 SNTA1Q13424 505 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 DECR1Q16698 335 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 KIF19Q2TAC6 998 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 PAPPA-AS1Q5QFB9 102 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 C18orf63Q68DL7 685 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 DHRS7BQ6IAN0 325 aaPredicted RBP4.11□□□□□ -1.75
HTT-210ENST00000512909 SLC30A6Q6NXT4 461 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 PAPD4Q6PIY7 484 aaKnown RBP4.11□□□□□ -1.75
HTT-210ENST00000512909 TPRG1Q6ZUI0 275 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 INTS8Q75QN2 995 aaKnown RBP4.11□□□□□ -1.75
HTT-210ENST00000512909 KBTBD6Q86V97 674 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 SPATA2LQ8IUW3 424 aaPredicted RBP4.11□□□□□ -1.75
HTT-210ENST00000512909 PM20D2Q8IYS1 436 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 BEST3Q8N1M1 668 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 SLC5A8Q8N695 610 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 KBTBD3Q8NAB2 608 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 GPRC5AQ8NFJ5 357 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 HMGCLL1Q8TB92 370 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 ACER1Q8TDN7 264 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 TRPC4APQ8TEL6 797 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 SLC22A18Q96BI1 424 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 CNDP2Q96KP4 475 aaKnown RBP4.11□□□□□ -1.75
HTT-210ENST00000512909 EGLN2Q96KS0 407 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 NEURL2Q9BR09 285 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 CCDC106Q9BWC9 280 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 RPAP3Q9H6T3 665 aaPredicted RBP4.11□□□□□ -1.75
HTT-210ENST00000512909 UBTD1Q9HAC8 227 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 HOXC10Q9NYD6 342 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 CLIC5Q9NZA1 410 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 BCCIPQ9P287 314 aaKnown RBP eCLIP4.11□□□□□ -1.75
HTT-210ENST00000512909 CLIP2Q9UDT6 1046 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 AMACRQ9UHK6 382 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 TINAGQ9UJW2 476 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 ZNF148Q9UQR1 794 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 TRPM7Q96QT4 1865 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 PAPPA2Q9BXP8 1791 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 OR2A25A4D2G3 310 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 GLOD5A6NK44 160 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 RANBP6O60518 1105 aaKnown RBP4.1□□□□□ -1.75
HTT-210ENST00000512909 TSPAN1O60635 241 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PRAMEF11O60813 436 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PRDM1O75626 825 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 KDM4BO94953 1096 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 CAVIN2O95810 425 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 APOA4P06727 396 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 CCL5P13501 91 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 SP100P23497 879 aaPredicted RBP4.1□□□□□ -1.75
HTT-210ENST00000512909 ART1P52961 327 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 CTSCP53634 463 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PNLIPRP2P54317 469 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PRMT2P55345 433 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 CCNA1P78396 465 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 IFI35P80217 286 aaPredicted RBP4.1□□□□□ -1.75
HTT-210ENST00000512909 PRKCZQ05513 592 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 COG2Q14746 738 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PSMD6Q15008 389 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 CCDC96Q2M329 555 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 C12orf60Q5U649 245 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 TMEM198Q66K66 360 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 NADSYN1Q6IA69 706 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 TATDN1Q6P1N9 297 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 CTR9Q6PD62 1173 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 BRAT1Q6PJG6 821 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 UNQ6126/PRO20091Q6UXV3 157 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 ZNF704Q6ZNC4 412 aaPredicted RBP4.1□□□□□ -1.75
HTT-210ENST00000512909 HAUS6Q7Z4H7 955 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PELI3Q8N2H9 469 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 POGLUT1Q8NBL1 392 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 TSPAN14Q8NG11 270 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 NUDCD2Q8WVJ2 157 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PIGTQ969N2 578 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 ZNF653Q96CK0 615 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 ERP27Q96DN0 273 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 IGSF21Q96ID5 467 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 ZNF479Q96JC4 524 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 GCNAQ96QF7 691 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 CDRT15Q96T59 188 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 EPYCQ99645 322 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 RIOK1Q9BRS2 568 aaKnown RBP4.1□□□□□ -1.75
HTT-210ENST00000512909 NAPBQ9H115 298 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 MMP27Q9H306 513 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 RABEP2Q9H5N1 569 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 ZCCHC17Q9NP64 241 aaKnown RBP4.1□□□□□ -1.75
HTT-210ENST00000512909 MARCH4Q9P2E8 410 aaPredicted RBP4.1□□□□□ -1.75
HTT-210ENST00000512909 DNAJB4Q9UDY4 337 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 KCNS2Q9ULS6 477 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 PCDHGB1Q9Y5G3 927 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 TTC41PQ6P2S7 1318 aa4.1□□□□□ -1.75
HTT-210ENST00000512909 TSPY2A6NKD2 308 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms