RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 GRIA1P42261 906 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 YAP1P46937 504 aaKnown RBP12.25□□□□□ -0.45
COL11A1-210ENST00000512756 CLCN4P51793 760 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 CRISP3P54108 245 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 AP1S2P56377 157 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 MVKQ03426 396 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 GAD2Q05329 585 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 PAFAH1B3Q15102 231 aaKnown RBP12.25□□□□□ -0.45
COL11A1-210ENST00000512756 ZBED5Q49AG3 693 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 BTN2A1Q7KYR7 527 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 OR13C4Q8NGS5 318 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 LCN9Q8WX39 176 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 CGREF1Q99674 301 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 CNPPD1Q9BV87 410 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 ASB3Q9Y575 518 aa12.25□□□□□ -0.45
COL11A1-210ENST00000512756 EFCAB9A8MZ26 197 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ARPC2O15144 300 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 NOBOXO60393 691 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 CYP11A1P05108 521 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 PCCBP05166 539 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 XRCC1P18887 633 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 PRKCHP24723 683 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 DNAJA1P31689 397 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ARHGDIBP52566 201 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 NFKB2Q00653 900 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 PUDPQ08623 228 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 GRB14Q14449 540 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 SPRYD7Q5W111 196 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 TPGS2Q68CL5 300 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 TXNRD3NBQ6F5E7 133 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ADNP2Q6IQ32 1131 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 TTLQ8NG68 377 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 SCAMP5Q8TAC9 235 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 CANT1Q8WVQ1 401 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 RNF31Q96EP0 1072 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 TRNT1Q96Q11 434 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 TRIM2Q9C040 744 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 EBF2Q9HAK2 575 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ITM2CQ9NQX7 267 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ZDHHC3Q9NYG2 299 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 CACNA1FO60840 1977 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ELNP15502 786 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 IGFBP4P22692 258 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 SMYD5Q6GMV2 418 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ZMIZ2Q8NF64 920 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 KBTBD7Q8WVZ9 684 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 TSEN15Q8WW01 171 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ART5Q96L15 291 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 OR52B2Q96RD2 323 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 SLC29A3Q9BZD2 475 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 POLR2J3Q9H1A7 115 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 C11orf16Q9NQ32 467 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 A0A1W2PRG6 482 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 PCDH7O60245 1069 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 DLX3O60479 287 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ECI2O75521 394 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ACADLP28330 430 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 AKIRIN2Q53H80 203 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 EPGNQ6UW88 154 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 FRRS1Q6ZNA5 592 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 LRRC70Q7Z2Q7 622 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 WFIKKN2Q8TEU8 576 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 SLC35F5Q8WV83 523 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 RBM18Q96H35 190 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 PAK6Q9NQU5 681 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 DUS2Q9NX74 493 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 FBXW2Q9UKT8 454 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 RBM7Q9Y580 266 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 HEBP2Q9Y5Z4 205 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 A0A1W2PRB8 838 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 PGLSO95336 258 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 POU2F1P14859 743 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 SLC10A7Q0GE19 358 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 MBOAT1Q6ZNC8 495 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 SLC51AQ86UW1 340 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 OR14C36Q8NHC7 312 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 CRELD1Q96HD1 420 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 VPS29Q9UBQ0 182 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 CFL2Q9Y281 166 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 A0A0X1KG70 313 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 IQCMA0A1B0GVH7 501 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 DUXAA6NLW8 204 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ZNF879B4DU55 563 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 DGKGP49619 791 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 RORCP51449 518 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ALDH3A2P51648 485 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 CRTC2Q53ET0 693 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 RBM23Q86U06 439 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 EXO5Q9H790 373 aa12.24□□□□□ -0.45
COL11A1-210ENST00000512756 DNAAF2Q9NVR5 837 aaKnown RBP12.24□□□□□ -0.45
COL11A1-210ENST00000512756 ZNF487B1APH4 448 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 RSL1D1O76021 490 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 MATN4O95460 622 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 MTHFD1P11586 935 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 MYCLP1P12525 358 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CKMT2P17540 419 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CARD16Q5EG05 197 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 ADGRF1Q5T601 910 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms