RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PDE12Q6L8Q7 609 aaKnown RBP8.78□□□□□ -1
VCAN-208ENST00000512590 OR11L1Q8NGX0 322 aa8.78□□□□□ -1
VCAN-208ENST00000512590 SLC5A11Q8WWX8 675 aa8.78□□□□□ -1
VCAN-208ENST00000512590 SLC38A4Q969I6 547 aa8.78□□□□□ -1
VCAN-208ENST00000512590 PARD6BQ9BYG5 372 aa8.78□□□□□ -1
VCAN-208ENST00000512590 TPSD1Q9BZJ3 242 aa8.78□□□□□ -1
VCAN-208ENST00000512590 OR8D2Q9GZM6 311 aa8.78□□□□□ -1
VCAN-208ENST00000512590 ZDHHC3Q9NYG2 299 aa8.78□□□□□ -1
VCAN-208ENST00000512590 CA5BQ9Y2D0 317 aa8.78□□□□□ -1
VCAN-208ENST00000512590 TLL2Q9Y6L7 1015 aa8.78□□□□□ -1
VCAN-208ENST00000512590 ZFP37Q9Y6Q3 630 aaPredicted RBP8.78□□□□□ -1
VCAN-208ENST00000512590 M0QZ24 198 aa8.78□□□□□ -1
VCAN-208ENST00000512590 CNOT4O95628 575 aaKnown RBP8.78□□□□□ -1
VCAN-208ENST00000512590 JUNDP17535 347 aa8.78□□□□□ -1
VCAN-208ENST00000512590 NAGLUP54802 743 aa8.78□□□□□ -1
VCAN-208ENST00000512590 SLC1A5Q15758 541 aa8.78□□□□□ -1
VCAN-208ENST00000512590 SLC18A3Q16572 532 aa8.78□□□□□ -1
VCAN-208ENST00000512590 PERM1Q5SV97 790 aa8.78□□□□□ -1
VCAN-208ENST00000512590 GJB7Q6PEY0 223 aa8.78□□□□□ -1
VCAN-208ENST00000512590 VSTM1Q6UX27 236 aa8.78□□□□□ -1
VCAN-208ENST00000512590 STRADAQ7RTN6 431 aa8.78□□□□□ -1
VCAN-208ENST00000512590 TATDN2Q93075 761 aa8.78□□□□□ -1
VCAN-208ENST00000512590 ATF6BQ99941 703 aa8.78□□□□□ -1
VCAN-208ENST00000512590 TWSG1Q9GZX9 223 aa8.78□□□□□ -1
VCAN-208ENST00000512590 C1orf21Q9H246 121 aa8.78□□□□□ -1
VCAN-208ENST00000512590 VNN3Q9NY84 501 aa8.78□□□□□ -1
VCAN-208ENST00000512590 RRP15Q9Y3B9 282 aaKnown RBP8.78□□□□□ -1
VCAN-208ENST00000512590 PCDHGB7Q9Y5F8 929 aa8.78□□□□□ -1
VCAN-208ENST00000512590 DGKBQ9Y6T7 804 aa8.78□□□□□ -1
VCAN-208ENST00000512590 IQCF5A8MTL0 148 aa8.77□□□□□ -1
VCAN-208ENST00000512590 VNN2O95498 520 aa8.77□□□□□ -1
VCAN-208ENST00000512590 CALB2P22676 271 aa8.77□□□□□ -1
VCAN-208ENST00000512590 THBS2P35442 1172 aa8.77□□□□□ -1
VCAN-208ENST00000512590 CDH4P55283 916 aa8.77□□□□□ -1
VCAN-208ENST00000512590 ABRAXAS2Q15018 415 aa8.77□□□□□ -1
VCAN-208ENST00000512590 OGFRL1Q5TC84 451 aaPredicted RBP8.77□□□□□ -1
VCAN-208ENST00000512590 LINGO4Q6UY18 593 aa8.77□□□□□ -1
VCAN-208ENST00000512590 MYRIPQ8NFW9 859 aa8.77□□□□□ -1
VCAN-208ENST00000512590 OR5L2Q8NGL0 311 aa8.77□□□□□ -1
VCAN-208ENST00000512590 S100ZQ8WXG8 99 aa8.77□□□□□ -1
VCAN-208ENST00000512590 RCN3Q96D15 328 aa8.77□□□□□ -1
VCAN-208ENST00000512590 BPIFA2Q96DR5 249 aa8.77□□□□□ -1
VCAN-208ENST00000512590 ACTR6Q9GZN1 396 aa8.77□□□□□ -1
VCAN-208ENST00000512590 EPB41L4AQ9HCS5 686 aaPredicted RBP8.77□□□□□ -1
VCAN-208ENST00000512590 ADAMTS4O75173 837 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 PEX11AO75192 247 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 PRAMEF12O95522 483 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 METTL18O95568 372 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CLIC3O95833 236 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 GNB3P16520 340 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 DDCP20711 480 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CTHP32929 405 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 KIR3DL1P43629 444 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CLCN5P51795 746 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 NCBP2P52298 156 aaKnown RBP eCLIP8.77□□□□□ -1.01
VCAN-208ENST00000512590 C2orf76Q3KRA6 126 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ARSIQ5FYB1 569 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 LRRC66Q68CR7 880 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 VHLLQ6RSH7 139 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ISCA1Q9BUE6 129 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 PCDH9Q9HC56 1237 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 GKN1Q9NS71 199 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ICKQ9UPZ9 632 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 FAM96BQ9Y3D0 163 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 FKBP7Q9Y680 259 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CNTNAP1P78357 1384 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 METTL21EPA6NDL7 271 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 SHISA7A6NL88 538 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 NDUFS4O43181 175 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 FGF1P05230 155 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 TCN2P20062 427 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 PON1P27169 355 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 MPIP34949 423 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CXCL12P48061 93 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 SLC1A6P48664 564 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 FXR1P51114 621 aaKnown RBP eCLIP8.77□□□□□ -1.01
VCAN-208ENST00000512590 TNK2Q07912 1038 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 OVGP1Q12889 678 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 N4BP2L1Q5TBK1 243 aaPredicted RBP8.77□□□□□ -1.01
VCAN-208ENST00000512590 USP49Q70CQ1 688 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 DNAAF5Q86Y56 855 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CILP2Q8IUL8 1156 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 SLC44A3Q8N4M1 653 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 OR4E2Q8NGC2 313 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 BTN2A3PQ96KV6 586 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 AMDHD1Q96NU7 426 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 C12orf4Q9NQ89 552 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ARHGAP20Q9P2F6 1191 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 PISDQ9UG56 409 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 NAALADL1Q9UQQ1 740 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 PCDHB1Q9Y5F3 818 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CTTNBP2Q8WZ74 1663 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 A0A1W2PPH5 198 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ARGFXA6NJG6 315 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 SLC38A8A6NNN8 435 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 GABRR3A8MPY1 467 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ENSAO43768 121 aaKnown RBP8.77□□□□□ -1.01
VCAN-208ENST00000512590 CSN2P05814 226 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 PABPC4LP0CB38 370 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms