RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ZBTB14O43829 449 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 FKBP9O95302 570 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 C9P02748 559 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 ABHD2P08910 425 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 JMJD7P0C870 316 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 TYRP1P17643 537 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 CYP2A7P20853 494 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 FDXRP22570 491 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 CSF2RBP32927 897 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 LSSP48449 732 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 ARL4DP49703 201 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 PDX1P52945 283 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 RAB15P59190 212 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 GPX6P59796 221 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 ABRQ12979 859 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 ARHGAP19Q14CB8 494 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 KYNUQ16719 465 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 TMEM164Q5U3C3 297 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 IRGCQ6NXR0 463 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 DUS1LQ6P1R4 473 aaKnown RBP8.88□□□□□ -0.99
NUP54-207ENST00000508583 ZNF549Q6P9A3 640 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 IGF2-ASQ6U949 168 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 XKR5Q6UX68 686 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 RAB11FIP2Q7L804 512 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 PRSS42Q7Z5A4 293 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 SLITRK4Q8IW52 837 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 FBXO39Q8N4B4 442 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 NKAPQ8N5F7 415 aaKnown RBP8.88□□□□□ -0.99
NUP54-207ENST00000508583 PPM1NQ8N819 430 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 SIDT2Q8NBJ9 832 aaKnown RBP8.88□□□□□ -0.99
NUP54-207ENST00000508583 FBXO15Q8NCQ5 510 aaPredicted RBP8.88□□□□□ -0.99
NUP54-207ENST00000508583 OR4E2Q8NGC2 313 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 OR5AR1Q8NGP9 310 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 CD200R1Q8TD46 325 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 ANKRD7Q92527 254 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 ATXN7L3BQ96GX2 97 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 CCDC74BQ96LY2 380 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 TGM7Q96PF1 710 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 RBBP8Q99708 897 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 TRIM54Q9BYV2 358 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 B3GNT4Q9C0J1 378 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 CDC42EP4Q9H3Q1 356 aaKnown RBP8.88□□□□□ -0.99
NUP54-207ENST00000508583 ACSS3Q9H6R3 686 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 THSD1Q9NS62 852 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 SPATA7Q9P0W8 599 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 PDP2Q9P2J9 529 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 PCDHB11Q9Y5F2 797 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 AK5Q9Y6K8 562 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 COL27A1Q8IZC6 1860 aaPredicted RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 PIPSLA2A3N6 862 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 GSAPA4D1B5 854 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 PSIP1O75475 530 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 DXOO77932 396 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 C1orf105O95561 183 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ACSL3O95573 720 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 INHBAP08476 426 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ITGA2BP08514 1039 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ENO2P09104 434 aaPredicted RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 HIST1H2AGP0C0S8 130 aaPredicted RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 STMN1P16949 149 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 HIST1H2ADP20671 130 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 CNTFP26441 200 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 GABRB3P28472 473 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ECHS1P30084 290 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 SERPINB9P50453 376 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 PMS2P54278 862 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ERVPABLB-1P60509 514 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 GABREP78334 506 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 PRKG2Q13237 762 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 USP10Q14694 798 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 KIR2DS3Q14952 304 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 RTP5Q14D33 572 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ACSBG2Q5FVE4 666 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 C3orf38Q5JPI3 329 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 SNAP47Q5SQN1 464 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 RBM20Q5T481 1227 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 TMTC4Q5T4D3 741 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 LGSNQ5TDP6 509 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 CACHD1Q5VU97 1274 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ANKS6Q68DC2 871 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 NAPRTQ6XQN6 538 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 B3GNT8Q7Z7M8 397 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 MARCH9Q86YJ5 346 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 VRK3Q8IV63 474 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 CPNE9Q8IYJ1 553 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 GIMAP7Q8NHV1 300 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 MCOLN3Q8TDD5 553 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 RSC1A1Q92681 617 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 LINGO1Q96FE5 620 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 PDLIM5Q96HC4 596 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 HIST1H2AHQ96KK5 128 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ZNF578Q96N58 590 aaPredicted RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 TEFMQ96QE5 360 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 GPR22Q99680 433 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 HIST1H2AJQ99878 128 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 CCDC77Q9BR77 488 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ZPBPQ9BS86 351 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 H2AFJQ9BTM1 129 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 FUT8Q9BYC5 575 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 ASPSCR1Q9BZE9 553 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms