RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 A0A1B0GTQ1 180 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 LRRD1A4D1F6 860 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 FAM149AA5PLN7 773 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 C3orf70A6NLC5 250 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 EIF3CLB5ME19 914 aaKnown RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 TRIM38O00635 465 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 AREL1O15033 823 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 FFAR2O15552 330 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 TPD52L2O43399 206 aaKnown RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 TSPAN6O43657 245 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 AP1G1O43747 822 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 MFSD11O43934 449 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PEX14O75381 377 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 NEBLO76041 1014 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 LDOC1O95751 146 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 JCHAINP01591 159 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 FTH1P19P0C7X4 201 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 RAP2AP10114 183 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 KRT10P13645 584 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ALOX15P16050 662 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 CTPS1P17812 591 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 WT1P19544 449 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 HNRNPA2B1P22626 353 aaKnown RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 DGKAP23743 735 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ADSLP30566 484 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 CSNK1DP48730 415 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PER3P56645 1201 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PROK1P58294 105 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 DYNLT1P63172 113 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 DSC2Q02487 901 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 BCL2L1Q07817 233 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 NIPAL4Q0D2K0 466 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 DNAJC3Q13217 504 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 C1orf61Q13536 156 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 FZD2Q14332 565 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 UGP2Q16851 508 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 WSCD2Q2TBF2 565 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 MST1LQ2TV78 715 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 SLC45A4Q5BKX6 768 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CFAP58Q5T655 872 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 FAXCQ5TGI0 409 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 MARC1Q5VT66 337 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 KAZNQ674X7 775 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 DENND2CQ68D51 928 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 NCBP2-AS2Q69YL0 99 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 NEK5Q6P3R8 708 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 RFLNAQ6ZTI6 216 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 KDELC2Q7Z4H8 507 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PTAR1Q7Z6K3 402 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 RFX6Q8HWS3 928 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CNGA4Q8IV77 575 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 SLC22A18ASQ8N1D0 253 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PELI3Q8N2H9 469 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ATPAF2Q8N5M1 289 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PDPRQ8NCN5 879 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CCNYQ8ND76 341 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 FAM71BQ8TC56 605 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CXorf40AQ8TE69 158 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 SAP25Q8TEE9 199 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CASKIN2Q8WXE0 1202 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CENPTQ96BT3 561 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 SARAFQ96BY9 339 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 LRIG1Q96JA1 1093 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ZNF641Q96N77 438 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 RNF157Q96PX1 679 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 LGMNQ99538 433 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 EIF3CQ99613 913 aaKnown RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 SCNM1Q9BWG6 230 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 HEMGNQ9BXL5 484 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 MAK16Q9BXY0 300 aaKnown RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 TCEAL2Q9H3H9 227 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 MS4A5Q9H3V2 200 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ATP13A3Q9H7F0 1226 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 C10orf88Q9H8K7 445 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 RBM22Q9NW64 420 aaKnown RBP eCLIP4.53□□□□□ -1.68
NUP54-206ENST00000508465 DNAJC28Q9NX36 388 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 DKK3Q9UBP4 350 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 KLK13Q9UKR3 277 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ANGPTL2Q9UKU9 493 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PNMA8BQ9ULN7 279 aaPredicted RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 TTLL3Q9Y4R7 772 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 OR1A2Q9Y585 309 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ALG6Q9Y672 507 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PLXNA2O75051 1894 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 DSPP15924 2871 aaKnown RBP4.53□□□□□ -1.68
NUP54-206ENST00000508465 TRPM6Q9BX84 2022 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 CXorf51AA0A1B0GTR3 108 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 A6NNZ2 444 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 F5H423 210 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 KCNK1O00180 336 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TRAFD1O14545 582 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 FPGTO14772 594 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 CASC3O15234 703 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 SPOPO43791 374 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 PCDHGA12O60330 932 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 DFNA5O60443 496 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 GCATO75600 419 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TM7SF2O76062 418 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 PCCBP05166 539 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 LPLP06858 475 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms