RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ZCCHC10Q8TBK6 192 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 THAP3Q8WTV1 239 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL6Q8WZ60 621 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RFFLQ8WZ73 363 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CNTNAP3BQ96NU0 1288 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 MENTQ9BUN1 341 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RIOK2Q9BVS4 552 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CNTNAP3Q9BZ76 1288 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ADNPQ9H2P0 1102 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SCN3BQ9NY72 215 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 NLGN3Q9NZ94 848 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 HMGXB4Q9UGU5 601 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PTRH2Q9Y3E5 179 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 FAM234BA2RU67 622 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 WASHC1A8K0Z3 465 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 A8MUA0 341 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 WASH3PC4AMC7 463 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SMAD7O15105 426 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PRODHO43272 600 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DPM1O60762 260 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC22O60826 627 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PHF2O75151 1096 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ENTPD5O75356 428 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 AKAP3O75969 853 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 FTH1P19P0C7X4 201 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GKP32189 559 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RPL4P36578 427 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CBX5P45973 191 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PIK3CGP48736 1102 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SERPINH1P50454 418 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 NRG3P56975 720 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DAOAP59103 153 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GNGT1P63211 74 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 IRF8Q02556 426 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DNAJC3Q13217 504 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 EIF4HQ15056 248 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ACSM2BQ68CK6 577 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 FAM45BPQ6NSW5 357 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DHRS13Q6UX07 377 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 WASH2PQ6VEQ5 465 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF783Q6ZMS7 281 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SLC35F6Q8N357 371 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 KIAA0895Q8NCT3 520 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ZMIZ2Q8NF64 920 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 FAM81AQ8TBF8 368 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DQX1Q8TE96 717 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 C1orf54Q8WWF1 131 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 LINC01599Q8WXQ3 324 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GIMAP5Q96F15 307 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DGAT2Q96PD7 388 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SEMA3CQ99985 751 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 BDH2Q9BUT1 245 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SLC25A23Q9BV35 468 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 TCF7L1Q9HCS4 588 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RRAGDQ9NQL2 400 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 NPDC1Q9NQX5 325 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CA5BQ9Y2D0 317 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL20Q9Y2M5 609 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHGA10Q9Y5H3 936 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CFAP20Q9Y6A4 193 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 KCNE2Q9Y6J6 123 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RIF1Q5UIP0 2472 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PRSS38A1L453 326 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 TTC24A2A3L6 582 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 HACD1B0YJ81 288 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 AREL1O15033 823 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SH3BGRLO75368 114 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CDK14O94921 469 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PTBP3O95758 552 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 S100A1P23297 94 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 L1CAMP32004 1257 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 HTR7P34969 479 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 HPCAL1P37235 193 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 IL12RB1P42701 662 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ARPC4P59998 168 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CTAG1AP78358 180 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 NKX3-2P78367 333 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ECH1Q13011 328 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 POU6F1Q14863 301 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CCNJQ5T5M9 372 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DENND5AQ6IQ26 1287 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RAB11FIP2Q7L804 512 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 NETO2Q8NC67 525 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SRFBP1Q8NEF9 429 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 STARD8Q92502 1023 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ZSCAN5AQ9BUG6 496 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ACAT2Q9BWD1 397 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 TAPBPLQ9BX59 468 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CD93Q9NPY3 652 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GPR83Q9NYM4 423 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CD300AQ9UGN4 299 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 FZD4Q9ULV1 537 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SOX13Q9UN79 622 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CHKBQ9Y259 395 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 IFT52Q9Y366 437 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 HELZP42694 1942 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 KRBA1A5PL33 1030 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ARGFXA6NJG6 315 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms