RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CHADO15335 359 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 CLDN11O75508 207 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 GLI4P10075 376 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ETS1P14921 441 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 TACR2P21452 398 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 MST1P26927 711 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 GABRR2P28476 465 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 EPHB2P29323 1055 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 IFNAR2P48551 515 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 PIK3CGP48736 1102 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 CDH4P55283 916 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 SESN2P58004 480 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 LIPEQ05469 1076 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 GPS1Q13098 491 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 DCTN2Q13561 401 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 CAMK1Q14012 370 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 MPP7Q5T2T1 576 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ADGRF1Q5T601 910 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 MED25Q71SY5 747 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 SPRED2Q7Z698 418 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 TMEM150AQ86TG1 271 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 SETD3Q86TU7 594 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NCLNQ969V3 563 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 EID2BQ96D98 161 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 XPO6Q96QU8 1125 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 RBM15Q96T37 977 aaKnown RBP eCLIP7.02□□□□□ -1.292e-9■■■■□ 19.3
CLCN3-206ENST00000507875 SELENOSQ9BQE4 189 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 RHBGQ9H310 441 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 USP29Q9HBJ7 922 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 RPRD1BQ9NQG5 326 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 EIF2B3Q9NR50 452 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 DKK3Q9UBP4 350 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 GGA2Q9UJY4 613 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NEU3Q9UQ49 428 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NOTCH4Q99466 2003 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ATXN2Q99700 1313 aaKnown RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 SHROOM3Q8TF72 1996 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 A0A1W2PR48 441 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 C16orf96A6NNT2 1141 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 HIDE1A8MVS5 230 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 PROM1O43490 865 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 FMO6PO60774 539 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 STC2O76061 302 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 MBL2P11226 248 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 NPPBP16860 134 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 PRKCAP17252 672 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 HOXB8P17481 243 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 TPSB2P20231 275 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 MAPK3P27361 379 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 MAGEA4P43358 317 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 CPA2P48052 419 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 ARF3P61204 181 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 DYNLT1P63172 113 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 IL13RA1P78552 427 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 ARF1P84077 181 aaKnown RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 MTM1Q13496 603 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 KCNC3Q14003 757 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 TPSAB1Q15661 275 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 RALGPS1Q5JS13 557 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 C1orf185Q5T7R7 199 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 B3GNT6Q6ZMB0 384 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 MICALCLQ6ZW33 695 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 EXOC3L1Q86VI1 746 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 SLC22A9Q8IVM8 553 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 CCDC13Q8IYE1 715 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 PYROXD2Q8N2H3 581 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF565Q8N9K5 539 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 NUP43Q8NFH3 380 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 VN1R2Q8NFZ6 395 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 OR5AN1Q8NGI8 311 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 HTR3CQ8WXA8 447 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 CABS1Q96KC9 395 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 KLC2Q9H0B6 622 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 SYNDIG1Q9H7V2 258 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 TLE6Q9H808 572 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 UBE2ZQ9H832 354 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF334Q9HCZ1 680 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 INTS10Q9NVR2 710 aaKnown RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 SAE1Q9UBE0 346 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 TRPS1Q9UHF7 1281 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 SNX8Q9Y5X2 465 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 C2orf16Q68DN1 1984 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 ANKRD65E5RJM6 399 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 SLC9A3R1O14745 358 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 MSI1O43347 362 aaKnown RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 SNRNP70P08621 437 aaKnown RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 GSTA2P09210 222 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 GARSP41250 739 aaKnown RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 PGFP49763 221 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 CCT8P50990 548 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 MC1RQ01726 317 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 CREB5Q02930 508 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 TFF2Q03403 129 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 STK11Q15831 433 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 PARP6Q2NL67 630 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 HSP90AA5PQ58FG0 334 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 PRSS36Q5K4E3 855 aa7.01□□□□□ -1.29
CLCN3-206ENST00000507875 RNASEH2BQ5TBB1 312 aaKnown RBP7.01□□□□□ -1.29
CLCN3-206ENST00000507875 RNF43Q68DV7 783 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms