RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 FGF11Q92914 225 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 GPR21Q99679 349 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 MAP3K3Q99759 626 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 MENTQ9BUN1 341 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 CCDC68Q9H2F9 335 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 FOXJ2Q9P0K8 574 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 AKAP7Q9P0M2 348 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 SEMA5BQ9P283 1151 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 CIDEBQ9UHD4 219 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 TDRKHQ9Y2W6 561 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 PCDHGA7Q9Y5G6 932 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 PSAT1Q9Y617 370 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 COMMD10Q9Y6G5 202 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 BAHCC1Q9P281 2608 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 PKD1L2Q7Z442 2459 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 IGHV5-51A0A0C4DH38 117 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 KRT87PA6NCN2 255 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 SRRM3A6NNA2 597 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 B4E171 279 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 TOX3O15405 576 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 PRAMEF10O60809 474 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 RASSF9O75901 435 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 SSTR1P30872 391 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 SLC5A2P31639 672 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 TSPAN7P41732 249 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 BDKRB1P46663 353 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 SEPHS1P49903 392 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 MGAT5Q09328 741 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 CUL1Q13616 776 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 CACHD1Q5VU97 1274 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 AMIGO1Q86WK6 493 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 CCDC25Q86WR0 208 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 DCUN1D3Q8IWE4 304 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 KLHL6Q8WZ60 621 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 USP7Q93009 1102 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 TWSG1Q9GZX9 223 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 SMYD2Q9NRG4 433 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 POLG2Q9UHN1 485 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 POMT2Q9UKY4 750 aa17.7■□□□□ 0.42
PDLIM7-216ENST00000506537 TLCD2A6NGC4 264 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 PIAS1O75925 651 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 MATN4O95460 622 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 PKLRP30613 574 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 CDKN2DP55273 166 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 GPX6P59796 221 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 SH3BP2P78314 561 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 CCSMST1Q4G0I0 132 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 DNTTIP2Q5QJE6 756 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 FBXO38Q6PIJ6 1188 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 LMNTD1Q8N9Z9 388 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 GABPB2Q8TAK5 448 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 SKA2Q8WVK7 121 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 CD180Q99467 661 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 ZFATQ9P243 1243 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 KLHL42Q9P2K6 505 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 DHRS7Q9Y394 339 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 ITPR1Q14643 2758 aa17.69■□□□□ 0.42
PDLIM7-216ENST00000506537 GSAPA4D1B5 854 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 NVLO15381 856 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 C1orf105O95561 183 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 C1QAP02745 245 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 PEBP1P30086 187 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 SHMT2P34897 504 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 EIF2S3P41091 472 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 PGGT1BP53609 377 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 PCBP4P57723 403 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 MC2RQ01718 297 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 KYNUQ16719 465 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 KLHL38Q2WGJ6 581 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 ARMC6Q6NXE6 501 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 CPNE9Q8IYJ1 553 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 CEP112Q8N8E3 955 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 LINC01555Q8NAE3 123 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 LRRN4CLQ8ND94 238 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 FLVCR1-AS1Q8TAF5 88 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 SLC41A2Q96JW4 573 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 IL17FQ96PD4 163 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 APMAPQ9HDC9 416 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 SLC39A1Q9NY26 324 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 SPHK1Q9NYA1 384 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 ACTR10Q9NZ32 417 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 RALYQ9UKM9 306 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 B3GALT1Q9Y5Z6 326 aa17.68■□□□□ 0.42
PDLIM7-216ENST00000506537 URB1O60287 2271 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 TCRBV9S1A1TA0A576 114 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 ARHGEF33A8MVX0 844 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 CXorf49A8MYA2 514 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 VPS26AO75436 327 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 RPN2P04844 631 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 CHRM5P08912 532 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 NELFEP18615 380 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 ECHS1P30084 290 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 MAGEA4P43358 317 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 PRKAA1Q13131 559 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 TTLL9Q3SXZ7 439 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 ANKS6Q68DC2 871 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 PALM2Q8IXS6 379 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 UBXN4Q92575 508 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms