RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 GPC4O75487 556 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 SCRG1O75711 98 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 FTH1P02794 183 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 CAPN1P07384 714 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 OR56A5P0C7T3 313 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 PRAMEP78395 509 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 KCNAB2Q13303 367 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 IL10RAQ13651 578 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 FASTKD1Q53R41 847 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 ARMC6Q6NXE6 501 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 ZNF517Q6ZMY9 492 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 SLC35F6Q8N357 371 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 LINC01555Q8NAE3 123 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 VPS37BQ9H9H4 285 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 KCND1Q9NSA2 647 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 CATSPERZQ9NTU4 200 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 GALPQ9UBC7 116 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 PADI1Q9ULC6 663 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 KLHL20Q9Y2M5 609 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 KCNMB2Q9Y691 235 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 SPENQ96T58 3664 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 TMEM150CB9EJG8 249 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 CD3EAPO15446 510 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 CREG1O75629 220 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 CHRM5P08912 532 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 TPSB2P20231 275 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 RORAP35398 523 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 ARL4DP49703 201 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 PRKAA1Q13131 559 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 TPSAB1Q15661 275 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 SPESP1Q6UW49 350 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 GSTA5Q7RTV2 222 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 CAND1Q86VP6 1230 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 TMEM126BQ8IUX1 230 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 TBC1D21Q8IYX1 336 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 SLC22A15Q8IZD6 547 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 C2orf73Q8N5S3 287 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 OR5K2Q8NHB8 316 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 KIFC1Q9BW19 673 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 CARD6Q9BX69 1037 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 TRIM55Q9BYV6 548 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 SLC25A18Q9H1K4 315 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 CHST8Q9H2A9 424 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 ACTL8Q9H568 366 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 ZNF71Q9NQZ8 489 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 PCDHGA6Q9Y5G7 932 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 NFS1Q9Y697 457 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 NUP210LQ5VU65 1888 aa16.18■□□□□ 0.18
PDLIM7-215ENST00000506161 UNC79Q9P2D8 2635 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 DOPEY2Q9Y3R5 2298 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 PIPSLA2A3N6 862 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 CDC14CA4D256 554 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 ZNF185O15231 689 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 DNAJB5O75953 348 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 GAS8O95995 478 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 PDGFAP04085 211 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 GSTM1P09488 218 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 SFTPCP11686 197 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 AOAHP28039 575 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 PKLRP30613 574 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 CCR10P46092 362 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 FOXL2P58012 376 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 GSTM4Q03013 218 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 HSPA14Q0VDF9 509 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 GPS1Q13098 491 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 UBAP2LQ14157 1087 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 PTCHD3Q3KNS1 767 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 SYTL3Q4VX76 610 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 ZNF385CQ66K41 422 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 LRRC8BQ6P9F7 803 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 FAM198BQ6UWH4 519 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 CARFQ8N187 725 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 CPT1BQ92523 772 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 PEX13Q92968 403 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 ABHD17AQ96GS6 310 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 BIRC8Q96P09 236 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 FCRL4Q96PJ5 515 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 LATS2Q9NRM7 1088 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 PCMTD2Q9NV79 361 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 TSR3Q9UJK0 312 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 SOX13Q9UN79 622 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 ANKRD12Q6UB98 2062 aa16.17■□□□□ 0.18
PDLIM7-215ENST00000506161 HEATR5BQ9P2D3 2071 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 C2orf74A8MZ97 194 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 NRP2O60462 931 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 CPNE3O75131 537 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 NIPSNAP2O75323 286 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 VAPBO95292 243 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 KRT14P02533 472 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 MAGEA6P43360 314 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 BDKRB1P46663 353 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 NPY2RP49146 381 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 CHAF1BQ13112 559 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 CRTC2Q53ET0 693 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 LYPLAL1Q5VWZ2 237 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms