RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 AIPL1Q9NZN9 384 aa5.8□□□□□ -1.48
GYPB-204ENST00000504951 GPN3Q9UHW5 284 aaPredicted RBP5.8□□□□□ -1.48
GYPB-204ENST00000504951 TMPRSS11EQ9UL52 423 aa5.8□□□□□ -1.48
GYPB-204ENST00000504951 CHKBQ9Y259 395 aa5.8□□□□□ -1.48
GYPB-204ENST00000504951 HEBP2Q9Y5Z4 205 aa5.8□□□□□ -1.48
GYPB-204ENST00000504951 VPS13CQ709C8 3753 aa5.8□□□□□ -1.48
GYPB-204ENST00000504951 CSPG4Q6UVK1 2322 aa5.8□□□□□ -1.48
GYPB-204ENST00000504951 TRGV8A0A0C4DH27 118 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 A0A1B0GTH6 734 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 CCDC78A2IDD5 438 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 OR6C74A6NCV1 312 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 MGAT4DA6NG13 374 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 CNOT3O75175 753 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 POP7O75817 140 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 LCA5LO95447 670 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 NADKO95544 446 aaPredicted RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 HLA-DQB2P05538 268 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 MMP2P08253 660 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 SNRPB2P08579 225 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 CCDC172P0C7W6 258 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 CBSLP0DN79 551 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 KLK2P20151 261 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 DNAJA1P31689 397 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 CBSP35520 551 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 ARL4AP40617 200 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 PRKCIP41743 596 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 DRG2P55039 364 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 SNRPNP63162 240 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 CSNK1G2P78368 415 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 FOLH1Q04609 750 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 ITKQ08881 620 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 GALNT2Q10471 571 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 PRKAA1Q13131 559 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 STX1AQ16623 288 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 PTCHD3Q3KNS1 767 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 LDLRAP1Q5SW96 308 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 MLIPQ5VWP3 458 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 NCBP2-AS2Q69YL0 99 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 TIGD7Q6NT04 549 aaPredicted RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 SASS6Q6UVJ0 657 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 KIRREL2Q6UWL6 708 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 CLEC17AQ6ZS10 378 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 OVCH1Q7RTY7 1134 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 BIVMQ86UB2 503 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 EID3Q8N140 333 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 Q8N3U1 123 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 OR1N1Q8NGS0 311 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 GPR150Q8NGU9 434 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 PSMF1Q92530 271 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 TADA1Q96BN2 335 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 CCM2Q9BSQ5 444 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 TLR10Q9BXR5 811 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 ZCCHC2Q9C0B9 1178 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 THAP2Q9H0W7 228 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 SEMA3GQ9NS98 782 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 ANO10Q9NW15 660 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 SOHLH2Q9NX45 425 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 IFT80Q9P2H3 777 aaPredicted RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 SEC14L3Q9UDX4 400 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 KCNN3Q9UGI6 736 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 NDOR1Q9UHB4 597 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 FBXL4Q9UKA2 621 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 NXT1Q9UKK6 140 aaKnown RBP5.79□□□□□ -1.48
GYPB-204ENST00000504951 MYO6Q9UM54 1294 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 EDARQ9UNE0 448 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 DNAJC16Q9Y2G8 782 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 MEMO1Q9Y316 297 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 NEU2Q9Y3R4 380 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 NUP210LQ5VU65 1888 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 CCDC88CQ9P219 2028 aa5.79□□□□□ -1.48
GYPB-204ENST00000504951 A0A087X0T9 212 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 C17orf113A0A1B0GUU1 675 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 DYTNA2CJ06 578 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 VSTM2BA6NLU5 285 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 E9PLN8 166 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 SLC19A2O60779 497 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 USP1O94782 785 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 KLHL18O94889 574 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 UNC5CO95185 931 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 MLYCDO95822 493 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 HPP00738 406 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 PIRTP0C851 137 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 FAM228BP0C875 321 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 ESRRAP11474 423 aaPredicted RBP5.78□□□□□ -1.48
GYPB-204ENST00000504951 ST6GAL1P15907 406 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 ITGAXP20702 1163 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 CDH3P22223 829 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 HMGCLP35914 325 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 CD151P48509 253 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 ZNF165P49910 485 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 IST1P53990 364 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 ARSFP54793 590 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 TAS2R40P59535 323 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 AP2B1P63010 937 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 GBE1Q04446 702 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 TYRO3Q06418 890 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 KLHL30Q0D2K2 578 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 Q0VFX4 171 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 SLC10A2Q12908 348 aaPredicted RBP5.78□□□□□ -1.48
GYPB-204ENST00000504951 GTF2H3Q13889 308 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms