RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 ZC3HC1Q86WB0 502 aaKnown RBP7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 SYT12Q8IV01 421 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 ARFGAP1Q8N6T3 406 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 SPPL2BQ8TCT7 592 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 PHF10Q8WUB8 498 aaKnown RBP7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 CHPT1Q8WUD6 406 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 DNAJA3Q96EY1 480 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 LINGO1Q96FE5 620 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 HIST1H2AHQ96KK5 128 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 HIST1H2AJQ99878 128 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 SEMA3CQ99985 751 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 H2AFJQ9BTM1 129 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 NANOGQ9H9S0 305 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 ZDHHC7Q9NXF8 308 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 GPR83Q9NYM4 423 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 TAS2R13Q9NYV9 303 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 CDV3Q9UKY7 258 aaKnown RBP7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 ATRNL1Q5VV63 1379 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SLC1A7O00341 560 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 B3GALNT1O75752 331 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 GLUD1P00367 558 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 PTPN3P26045 913 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SLC18A1P54219 525 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 PTSQ03393 145 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 LRRC73Q5JTD7 316 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SPANXN4Q5MJ08 99 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CLEC12AQ5QGZ9 265 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ATAD3CQ5T2N8 411 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 RETREG3Q86VR2 466 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SLC35B4Q969S0 331 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 RDH12Q96NR8 316 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 C1QTNF6Q9BXI9 259 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM118AQ9NWS6 357 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 GMIPQ9P107 970 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CNTN6Q9UQ52 1028 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 IFT52Q9Y366 437 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 COL2A1P02458 1487 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ARPC4-TTLL3A0A0A6YYG9 625 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 A0A0G2JPF8 293 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 HNRNPCL3B7ZW38 293 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FZD9O00144 591 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 GPR25O00155 361 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 PRMT5O14744 637 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CHRNA1P02708 482 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 HNRNPCL4P0DMR1 293 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 PRKCHP24723 683 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 HLCSP50747 726 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 GEMP55040 296 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CLCA4Q14CN2 919 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 LRRC37A5PQ49AS3 106 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 LIPKQ5VXJ0 399 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 PLCZ1Q86YW0 608 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM20CQ8IXL6 584 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 TMEM102Q8N9M5 508 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 OR13J1Q8NGT2 312 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 OR5AK3PQ8NH89 298 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ZNF431Q8TF32 576 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 GPR78Q96P69 363 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 RBM4BQ9BQ04 359 aaKnown RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 RBM4Q9BWF3 364 aaKnown RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SUCOQ9UBS9 1254 aaKnown RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 UTS2RQ9UKP6 389 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ANGPT4Q9Y264 503 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM72CH0Y354 149 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 M0QZ92 97 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SLC22A1O15245 554 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 TRIM3O75382 744 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ULK1O75385 1050 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SPNP16150 400 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 MYL12AP19105 171 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CBLP22681 906 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 GLDCP23378 1020 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 PRDX3P30048 256 aaKnown RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ALDH3A2P51648 485 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 AAK1Q2M2I8 961 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 HSDL1Q3SXM5 330 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM72AQ5TYM5 149 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM72DQ6L9T8 149 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 DLK2Q6UY11 383 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 C16orf59Q7L2K0 433 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 GLCCI1Q86VQ1 547 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM72BQ86X60 149 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ZNF433Q8N7K0 673 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CMASQ8NFW8 434 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 OR56A4Q8NGH8 313 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SH3KBP1Q96B97 665 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 FIZ1Q96SL8 496 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 HOPXQ9BPY8 73 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SEZ6LQ9BYH1 1024 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 TUBB1Q9H4B7 451 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 TBC1D24Q9ULP9 559 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SNX7Q9UNH6 387 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SPIN1Q9Y657 262 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 ROBO3Q96MS0 1386 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CASP8AP2Q9UKL3 1982 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 CIB4A0PJX0 185 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 TNFRSF10AO00220 468 aa7.66□□□□□ -1.18
ATP2C1-208ENST00000504948 SAP18O00422 153 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms