RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PROS1P07225 676 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 INHBAP08476 426 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 ZNF37AP17032 561 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 AMD1P17707 334 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 SAT1P21673 171 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 CCNFP41002 786 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 MSH2P43246 934 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 SERPINB9P50453 376 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 SLC12A2P55011 1212 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 CFHR1Q03591 330 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 PRKG2Q13237 762 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 USP10Q14694 798 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 NAA30Q147X3 362 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 ZKSCAN8Q15776 578 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 AMZ1Q400G9 498 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 SWT1Q5T5J6 900 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 TTC23LQ6PF05 361 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 KLHL35Q6PF15 583 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 WDR74Q6RFH5 385 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 RBM44Q6ZP01 1051 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 USP53Q70EK8 1073 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 TMPRSS7Q7RTY8 843 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 CEP97Q8IW35 865 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 GALNT15Q8N3T1 639 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 FBXO15Q8NCQ5 510 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 OR52E1Q8NGJ3 308 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 MAGEC3Q8TD91 643 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 UBLCP1Q8WVY7 318 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 ASB11Q8WXH4 323 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 ANKRD7Q92527 254 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 CAVIN3Q969G5 261 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 RAD51AP1Q96B01 352 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 MRRFQ96E11 262 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 PAFAH2Q99487 392 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 HGH1Q9BTY7 390 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 DHRS4Q9BTZ2 278 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 RAB33BQ9H082 229 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 SYTL2Q9HCH5 934 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 EPHA6Q9UF33 1036 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 IKBKGQ9Y6K9 419 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 HMX2A2RU54 273 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 POC1B-GALNT4F8VUJ3 575 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 SEC16AO15027 2179 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TSPAN12O95859 305 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 MT-CO3P00414 261 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CATP04040 527 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 C8GP07360 202 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TPBGLP0DKB5 382 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 STMN1P16949 149 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TYRP1P17643 537 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CNTFP26441 200 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CSF2RBP32927 897 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 PGGT1BP53609 377 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 RAB10P61026 200 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 GRB7Q14451 532 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 UAP1Q16222 522 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 HES3Q5TGS1 186 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 NKAIN2Q5VXU1 208 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TMEM71Q6P5X7 295 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TMEM207Q6UWW9 146 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TAOK1Q7L7X3 1001 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 ERMP1Q7Z2K6 904 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 PIWIL4Q7Z3Z4 852 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CCDC91Q7Z6B0 441 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 PLXDC1Q8IUK5 500 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CNPY4Q8N129 248 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 MYO1HQ8N1T3 1032 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CHCHD4Q8N4Q1 142 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 NKAPQ8N5F7 415 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 DCBLD1Q8N8Z6 715 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 OR4E2Q8NGC2 313 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 OR4D9Q8NGE8 314 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 DCAKDQ8WVC6 231 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 LCN9Q8WX39 176 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 JPH3Q8WXH2 748 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 GRAMD1AQ96CP6 724 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 LINGO1Q96FE5 620 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 DEPDC7Q96QD5 511 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CCDC77Q9BR77 488 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 NUDT22Q9BRQ3 303 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 MENTQ9BUN1 341 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TWSG1Q9GZX9 223 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 SRMSQ9H3Y6 488 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CAB39LQ9H9S4 337 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 RDH14Q9HBH5 336 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 PDP2Q9P2J9 529 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 ATXN7L1Q9ULK2 861 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 WASF3Q9UPY6 502 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 CLCA2Q9UQC9 943 aa11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 RUVBL2Q9Y230 463 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 TDRKHQ9Y2W6 561 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 MN1Q10571 1320 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-208ENST00000504489 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 ARHGEF33A8MVX0 844 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 TMX2-CTNND1H3BSU7 103 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 SLC16A5O15375 505 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 ZBTB14O43829 449 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 KRT38O76015 456 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 C9P02748 559 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms