RNA–Protein interactions for RNA: ENST00000504086.1

ITGA1-202, Transcript of integrin subunit alpha 1, humanhuman

TSL 2

Gene ITGA1, Length 1,366 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-202ENST00000504086 GBX1Q14549 363 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 C16orf72Q14CZ0 275 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 CACHD1Q5VU97 1274 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 FAM129CQ86XR2 697 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 MRRFQ96E11 262 aaKnown RBP17.12■□□□□ 0.33
ITGA1-202ENST00000504086 CPNE1Q99829 537 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 CDC42EP4Q9H3Q1 356 aaKnown RBP17.12■□□□□ 0.33
ITGA1-202ENST00000504086 RHOJQ9H4E5 214 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 PISDQ9UG56 409 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 SLC39A10Q9ULF5 831 aa17.12■□□□□ 0.33
ITGA1-202ENST00000504086 PMS2P1A4D2B8 440 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 BTN3A1O00481 513 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 HGSO14964 777 aaPredicted RBP17.11■□□□□ 0.33
ITGA1-202ENST00000504086 SLU7O95391 586 aaKnown RBP17.11■□□□□ 0.33
ITGA1-202ENST00000504086 CATP04040 527 aaKnown RBP17.11■□□□□ 0.33
ITGA1-202ENST00000504086 CBSLP0DN79 551 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 RBMS1P29558 406 aaKnown RBP17.11■□□□□ 0.33
ITGA1-202ENST00000504086 CBSP35520 551 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 GP5P40197 560 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 CCNFP41002 786 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 MAPK10P53779 464 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 CYP4F3Q08477 520 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 SLMAPQ14BN4 828 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 EFTUD2Q15029 972 aaKnown RBP eCLIP17.11■□□□□ 0.33
ITGA1-202ENST00000504086 PAQR3Q6TCH7 311 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 CYS1Q717R9 158 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 GSPT2Q8IYD1 628 aaKnown RBP17.11■□□□□ 0.33
ITGA1-202ENST00000504086 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 AGBL5Q8NDL9 886 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 MDM1Q8TC05 714 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 VPS39Q96JC1 886 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 OLFM1Q99784 485 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 CCDC86Q9H6F5 360 aaKnown RBP17.11■□□□□ 0.33
ITGA1-202ENST00000504086 EPHA6Q9UF33 1036 aa17.11■□□□□ 0.33
ITGA1-202ENST00000504086 COL27A1Q8IZC6 1860 aaPredicted RBP17.1■□□□□ 0.33
ITGA1-202ENST00000504086 BTN3A3O00478 584 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 KIF1CO43896 1103 aaKnown RBP17.1■□□□□ 0.33
ITGA1-202ENST00000504086 BRINP1O60477 761 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 TNFSF15O95150 251 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 C1orf105O95561 183 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 SYF2O95926 243 aaKnown RBP17.1■□□□□ 0.33
ITGA1-202ENST00000504086 C9P02748 559 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 MPC1LP0DKB6 136 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 ITIH1P19827 911 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 FDXRP22570 491 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 MAP4P27816 1152 aaKnown RBP17.1■□□□□ 0.33
ITGA1-202ENST00000504086 LSSP48449 732 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 ARL4DP49703 201 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 PGGT1BP53609 377 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 NAB1Q13506 487 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 RTP5Q14D33 572 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 UAP1Q16222 522 aaPredicted RBP17.1■□□□□ 0.33
ITGA1-202ENST00000504086 LRRC8EQ6NSJ5 796 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 NEK10Q6ZWH5 1172 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 PIWIL4Q7Z3Z4 852 aaKnown RBP17.1■□□□□ 0.33
ITGA1-202ENST00000504086 RELL1Q8IUW5 271 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 MYO1HQ8N1T3 1032 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 C2orf73Q8N5S3 287 aaPredicted RBP17.1■□□□□ 0.33
ITGA1-202ENST00000504086 EEF1AKMT1Q8WVE0 214 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 RAD51AP1Q96B01 352 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 LINGO1Q96FE5 620 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 IL17FQ96PD4 163 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 RAB33BQ9H082 229 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 SSUH2Q9Y2M2 353 aa17.1■□□□□ 0.33
ITGA1-202ENST00000504086 A0A1W2PNU3 283 aaPredicted RBP17.09■□□□□ 0.33
ITGA1-202ENST00000504086 PIPSLA2A3N6 862 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 KRT87PA6NCN2 255 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 EFCAB7A8K855 629 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 C2orf74A8MZ97 194 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 MATN2O00339 956 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 MATN4O95460 622 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 CDH3P22223 829 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 PKLRP30613 574 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 IL2P60568 153 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 TIAL1Q01085 375 aaKnown RBP eCLIP17.09■□□□□ 0.335e-7■■□□□ 12.6
ITGA1-202ENST00000504086 ILF2Q12905 390 aaKnown RBP17.09■□□□□ 0.33
ITGA1-202ENST00000504086 UBAP2Q5T6F2 1119 aaKnown RBP17.09■□□□□ 0.33
ITGA1-202ENST00000504086 TAX1BP1Q86VP1 789 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 UHMK1Q8TAS1 419 aaKnown RBP17.09■□□□□ 0.33
ITGA1-202ENST00000504086 CYTH2Q99418 400 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 CD180Q99467 661 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 RBBP8Q99708 897 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 MAP3K3Q99759 626 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 RAB11FIP5Q9BXF6 653 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 ACTR10Q9NZ32 417 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 OR6C2Q9NZP2 312 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 PDP2Q9P2J9 529 aa17.09■□□□□ 0.33
ITGA1-202ENST00000504086 MTO1Q9Y2Z2 717 aaKnown RBP17.09■□□□□ 0.33
ITGA1-202ENST00000504086 PABPN1LA6NDY0 278 aaKnown RBP17.08■□□□□ 0.32
ITGA1-202ENST00000504086 TLCD2A6NGC4 264 aa17.08■□□□□ 0.32
ITGA1-202ENST00000504086 ARHGEF33A8MVX0 844 aa17.08■□□□□ 0.32
ITGA1-202ENST00000504086 ISM1B1AKI9 464 aa17.08■□□□□ 0.32
ITGA1-202ENST00000504086 EIF3FO00303 357 aaPredicted RBP17.08■□□□□ 0.32
ITGA1-202ENST00000504086 RASGRF2O14827 1237 aa17.08■□□□□ 0.32
ITGA1-202ENST00000504086 FAM155BO75949 473 aa17.08■□□□□ 0.32
ITGA1-202ENST00000504086 CHRM5P08912 532 aaPredicted RBP17.08■□□□□ 0.32
ITGA1-202ENST00000504086 CCL4P13236 92 aa17.08■□□□□ 0.32
ITGA1-202ENST00000504086 SPRP35270 261 aaPredicted RBP17.08■□□□□ 0.32
ITGA1-202ENST00000504086 RAB28P51157 221 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms