RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 HOXB9P17482 250 aaPredicted RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 IDUAP35475 653 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 GRK3P35626 688 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 MVKQ03426 396 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 EMX1Q04741 257 aaPredicted RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 ZNF177Q13360 481 aaPredicted RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 ATP1A4Q13733 1029 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 TRIM16LQ309B1 348 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 USP39Q53GS9 565 aaKnown RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 INO80DQ53TQ3 878 aaPredicted RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 SPANXN4Q5MJ08 99 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 SYT6Q5T7P8 510 aaPredicted RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 MSANTD1Q6ZTZ1 278 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 DET1Q7L5Y6 550 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 OVCA2Q8WZ82 227 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 PLD4Q96BZ4 506 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 EXOC2Q96KP1 924 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 NSUN3Q9H649 340 aaKnown RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 LRTM1Q9HBL6 345 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 SARS2Q9NP81 518 aaKnown RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 PAK1IP1Q9NWT1 392 aaPredicted RBP14.67□□□□□ -0.06
SNF8-203ENST00000504000 C1orf109Q9NX04 203 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 OPTCQ9UBM4 332 aa14.67□□□□□ -0.06
SNF8-203ENST00000504000 NPIPB8E9PQR5 432 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 ADAMTS4O75173 837 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 COQ9O75208 318 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 E2F6O75461 281 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 COL6A1P12109 1028 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 AGXTP21549 392 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 SERPINB10P48595 397 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 CLDN8P56748 225 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 RPS3AP61247 264 aaKnown RBP14.66□□□□□ -0.06
SNF8-203ENST00000504000 ABHD18Q0P651 414 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 AAK1Q2M2I8 961 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 TTLL9Q3SXZ7 439 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 LYPLAL1Q5VWZ2 237 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 CPZQ66K79 652 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 CAPN13Q6MZZ7 669 aaPredicted RBP14.66□□□□□ -0.06
SNF8-203ENST00000504000 LRRC8DQ7L1W4 858 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 RTN4RL1Q86UN2 441 aaPredicted RBP14.66□□□□□ -0.06
SNF8-203ENST00000504000 RBFAQ8N0V3 343 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 LIX1Q8N485 282 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 TMCO5AQ8N6Q1 288 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 RORBQ92753 470 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 ALPK1Q96QP1 1244 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 OR52E6Q96RD3 313 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 PSD2Q9BQI7 771 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 CPPED1Q9BRF8 314 aaPredicted RBP14.66□□□□□ -0.06
SNF8-203ENST00000504000 CIPCQ9C0C6 399 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 CLPBQ9H078 707 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 RMND5AQ9H871 391 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 ANKHQ9HCJ1 492 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 LATS2Q9NRM7 1088 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 ELOVL2Q9NXB9 296 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 ZMYM5Q9UJ78 669 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
SNF8-203ENST00000504000 BCKDKO14874 412 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 PER2O15055 1255 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 CCNDBP1O95273 360 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 PRPS2P11908 318 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 ACPPP15309 386 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 PRPH2P23942 346 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 HSPA7P48741 367 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 CCR3P51677 355 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 MAPK10P53779 464 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 RPS24P62847 133 aaKnown RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 SLC35A2P78381 396 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 DGUOKQ16854 277 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 C18orf21Q32NC0 220 aaPredicted RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 PTRHD1Q6GMV3 140 aaKnown RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 FAM43BQ6ZT52 329 aaPredicted RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 TMEM179BQ7Z7N9 219 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 HS3ST5Q8IZT8 346 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 TMEM132CQ8N3T6 1108 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 EFHBQ8N7U6 833 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 OR7A2PQ8NGA2 310 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 FAM120BQ96EK7 910 aaKnown RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 FAM193BQ96PV7 902 aaPredicted RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 HHIPQ96QV1 700 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 HBEGFQ99075 208 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 DGCR6LQ9BY27 220 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 TNKS2Q9H2K2 1166 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 BPIFA1Q9NP55 256 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 CCNB1IP1Q9NPC3 277 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 SERHLQ9NQF3 203 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 KLHL42Q9P2K6 505 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 MTRRQ9UBK8 725 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 INTS6Q9UL03 887 aaKnown RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 ZNF490Q9ULM2 529 aaPredicted RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 SAMD4AQ9UPU9 718 aaKnown RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 PRG3Q9Y2Y8 225 aaPredicted RBP14.65□□□□□ -0.06
SNF8-203ENST00000504000 ANGPTL3Q9Y5C1 460 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 PCDHGA4Q9Y5G9 962 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 ANKRD12Q6UB98 2062 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 TRBV5-4A0A0C4DH59 114 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 IQCF5A8MTL0 148 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 MANBAO00462 879 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 SEC22BO75396 215 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 INMTO95050 263 aa14.65□□□□□ -0.06
SNF8-203ENST00000504000 VNN2O95498 520 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms