RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 BSNQ9UPA5 3926 aa21.35■■□□□ 1.01
LSM6-203ENST00000503982 MYO18BQ8IUG5 2567 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 MEN1O00255 615 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 UGT2B7P16662 529 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 RPL22P35268 128 aaKnown RBP21.34■■□□□ 1.01
LSM6-203ENST00000503982 TERF1P54274 439 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 PMS2P54278 862 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 HSPA14Q0VDF9 509 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 KLRB1Q12918 225 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 UGT8Q16880 541 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 AARS2Q5JTZ9 985 aaKnown RBP21.34■■□□□ 1.01
LSM6-203ENST00000503982 UNC5AQ6ZN44 842 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 DSELQ8IZU8 1212 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 ENDOVQ8N8Q3 282 aaKnown RBP21.34■■□□□ 1.01
LSM6-203ENST00000503982 C19orf47Q8N9M1 422 aaKnown RBP21.34■■□□□ 1.01
LSM6-203ENST00000503982 GLIS1Q8NBF1 620 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 OR5K2Q8NHB8 316 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 GSDMBQ8TAX9 411 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 ACSS2Q9NR19 701 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 CATSPERZQ9NTU4 200 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 TRMT1Q9NXH9 659 aaKnown RBP21.34■■□□□ 1.01
LSM6-203ENST00000503982 TLK1Q9UKI8 766 aa21.34■■□□□ 1.01
LSM6-203ENST00000503982 TNRC6AQ8NDV7 1962 aaKnown RBP21.34■■□□□ 1.01
LSM6-203ENST00000503982 SLC5A10A0PJK1 596 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 ARGFXA6NJG6 315 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 CES2O00748 559 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 CHRM5P08912 532 aaPredicted RBP21.33■■□□□ 1.01
LSM6-203ENST00000503982 PSMA3P25788 255 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 CASRP41180 1078 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 TMED2Q15363 201 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 CCNG2Q16589 344 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 DEFB110Q30KQ9 67 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 PLEKHS1Q5SXH7 462 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 PTRHD1Q6GMV3 140 aaKnown RBP21.33■■□□□ 1.01
LSM6-203ENST00000503982 ASB18Q6ZVZ8 466 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 LDB1Q86U70 411 aaPredicted RBP21.33■■□□□ 1.01
LSM6-203ENST00000503982 SYTL1Q8IYJ3 562 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 SLC38A9Q8NBW4 561 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 THAP4Q8WY91 577 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 PITPNM3Q9BZ71 974 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 CHRAC1Q9NRG0 131 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 RIMKLBQ9ULI2 386 aa21.33■■□□□ 1.01
LSM6-203ENST00000503982 CEP104O60308 925 aa21.32■■□□□ 1
LSM6-203ENST00000503982 DNAJB5O75953 348 aa21.32■■□□□ 1
LSM6-203ENST00000503982 RECKO95980 971 aa21.32■■□□□ 1
LSM6-203ENST00000503982 FGGP02679 453 aa21.32■■□□□ 1
LSM6-203ENST00000503982 APOA4P06727 396 aa21.32■■□□□ 1
LSM6-203ENST00000503982 AGXTP21549 392 aa21.32■■□□□ 1
LSM6-203ENST00000503982 ACADLP28330 430 aa21.32■■□□□ 1
LSM6-203ENST00000503982 CHAF1BQ13112 559 aa21.32■■□□□ 1
LSM6-203ENST00000503982 IL10RAQ13651 578 aa21.32■■□□□ 1
LSM6-203ENST00000503982 SEMA3AQ14563 771 aa21.32■■□□□ 1
LSM6-203ENST00000503982 PTCHD3Q3KNS1 767 aa21.32■■□□□ 1
LSM6-203ENST00000503982 PCID2Q5JVF3 399 aa21.32■■□□□ 1
LSM6-203ENST00000503982 IZUMO3Q5VZ72 239 aa21.32■■□□□ 1
LSM6-203ENST00000503982 C4orf22Q6V702 233 aa21.32■■□□□ 1
LSM6-203ENST00000503982 CDHR3Q6ZTQ4 885 aa21.32■■□□□ 1
LSM6-203ENST00000503982 LRFN5Q96NI6 719 aa21.32■■□□□ 1
LSM6-203ENST00000503982 SPHK1Q9NYA1 384 aa21.32■■□□□ 1
LSM6-203ENST00000503982 BFARQ9NZS9 450 aa21.32■■□□□ 1
LSM6-203ENST00000503982 TTC7AQ9ULT0 858 aaPredicted RBP21.32■■□□□ 1
LSM6-203ENST00000503982 ZKSCAN5Q9Y2L8 839 aa21.32■■□□□ 1
LSM6-203ENST00000503982 SNRNP200O75643 2136 aaKnown RBP21.32■■□□□ 1
LSM6-203ENST00000503982 A0A0J9YY10 115 aa21.31■■□□□ 1
LSM6-203ENST00000503982 IQCF5A8MTL0 148 aa21.31■■□□□ 1
LSM6-203ENST00000503982 C9J4A7 227 aa21.31■■□□□ 1
LSM6-203ENST00000503982 ZNF749O43361 778 aa21.31■■□□□ 1
LSM6-203ENST00000503982 HBQ1P09105 142 aa21.31■■□□□ 1
LSM6-203ENST00000503982 CCR7P32248 378 aa21.31■■□□□ 1
LSM6-203ENST00000503982 CCL11P51671 97 aa21.31■■□□□ 1
LSM6-203ENST00000503982 CRADDP78560 199 aa21.31■■□□□ 1
LSM6-203ENST00000503982 DNAJC21Q5F1R6 531 aaKnown RBP21.31■■□□□ 1
LSM6-203ENST00000503982 LCN10Q6JVE6 187 aa21.31■■□□□ 1
LSM6-203ENST00000503982 TCTN3Q6NUS6 607 aa21.31■■□□□ 1
LSM6-203ENST00000503982 ZNF534Q76KX8 674 aa21.31■■□□□ 1
LSM6-203ENST00000503982 KRT222Q8N1A0 295 aa21.31■■□□□ 1
LSM6-203ENST00000503982 SLC35F6Q8N357 371 aa21.31■■□□□ 1
LSM6-203ENST00000503982 SKA2Q8WVK7 121 aaPredicted RBP21.31■■□□□ 1
LSM6-203ENST00000503982 TCTN2Q96GX1 697 aa21.31■■□□□ 1
LSM6-203ENST00000503982 OR2A14Q96R47 310 aa21.31■■□□□ 1
LSM6-203ENST00000503982 PCMTD2Q9NV79 361 aa21.31■■□□□ 1
LSM6-203ENST00000503982 OR6C2Q9NZP2 312 aa21.31■■□□□ 1
LSM6-203ENST00000503982 GPN3Q9UHW5 284 aaPredicted RBP21.31■■□□□ 1
LSM6-203ENST00000503982 BHMG1C9JSJ3 638 aaPredicted RBP21.3■■□□□ 1
LSM6-203ENST00000503982 CD3EAPO15446 510 aaKnown RBP21.3■■□□□ 1
LSM6-203ENST00000503982 NDUFS3O75489 264 aa21.3■■□□□ 1
LSM6-203ENST00000503982 OR2B3O76000 313 aa21.3■■□□□ 1
LSM6-203ENST00000503982 RPN2P04844 631 aa21.3■■□□□ 1
LSM6-203ENST00000503982 RAB40ALP0C0E4 278 aa21.3■■□□□ 1
LSM6-203ENST00000503982 KCNJ1P48048 391 aa21.3■■□□□ 1
LSM6-203ENST00000503982 TTPAP49638 278 aa21.3■■□□□ 1
LSM6-203ENST00000503982 CPZQ66K79 652 aa21.3■■□□□ 1
LSM6-203ENST00000503982 TTC23LQ6PF05 361 aa21.3■■□□□ 1
LSM6-203ENST00000503982 RASGEF1CQ8N431 466 aa21.3■■□□□ 1
LSM6-203ENST00000503982 C2orf73Q8N5S3 287 aaPredicted RBP21.3■■□□□ 1
LSM6-203ENST00000503982 LKAAEAR1Q8TD35 194 aa21.3■■□□□ 1
LSM6-203ENST00000503982 ASZ1Q8WWH4 475 aa21.3■■□□□ 1
LSM6-203ENST00000503982 PBKQ96KB5 322 aa21.3■■□□□ 1
LSM6-203ENST00000503982 TRIM55Q9BYV6 548 aa21.3■■□□□ 1
LSM6-203ENST00000503982 EIF2B3Q9NR50 452 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms