RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CFAP206Q8IYR0 622 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 PGAM4Q8N0Y7 254 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 SNX31Q8N9S9 440 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 FBXO15Q8NCQ5 510 aaPredicted RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 OR2L2Q8NH16 312 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 CFAP61Q8NHU2 1237 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 WDR60Q8WVS4 1066 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 MAGEB10Q96LZ2 347 aaPredicted RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 DNAJC11Q9NVH1 559 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 AIG1Q9NVV5 245 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 FBXL12Q9NXK8 326 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 ADAM23O75077 832 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 POP7O75817 140 aaKnown RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 KLF8O95600 359 aaPredicted RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 HOXB2P14652 356 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 HTR6P50406 440 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 RPS21P63220 83 aaKnown RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 CDK3Q00526 305 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 GGTA1PQ4G0N0 100 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 HEATR4Q86WZ0 1026 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 ZNF547Q8IVP9 402 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 KLHDC8AQ8IYD2 350 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 SLC44A3Q8N4M1 653 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 HM13Q8TCT9 377 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 GANCQ8TET4 914 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 MKRN2Q9H000 416 aaKnown RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 DPEP2Q9H4A9 486 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 HEBP1Q9NRV9 189 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 TMEM45AQ9NWC5 275 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 SCML1Q9UN30 329 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 RNF11Q9Y3C5 154 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 GPR45Q9Y5Y3 372 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 BBIP1A8MTZ0 92 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 SLC28A1O00337 649 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 CHUKO15111 745 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 PLRG1O43660 514 aaKnown RBP21.45■■□□□ 1.02
PTPN13-205ENST00000502971 EPORP19235 508 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 PDHA2P29803 388 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 MMEL1Q495T6 779 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 C6orf136Q5SQH8 315 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 PTCRAQ6ISU1 281 aaPredicted RBP21.45■■□□□ 1.02
PTPN13-205ENST00000502971 KIAA1161Q6NSJ0 714 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 FBXW8Q8N3Y1 598 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 SERPINI1Q99574 410 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 NPAS2Q99743 824 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 ACTR8Q9H981 624 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 RNPEPL1Q9HAU8 725 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 KCNK12Q9HB15 430 aa21.45■■□□□ 1.02
PTPN13-205ENST00000502971 A0A1W2PQF6 199 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 MGAT4DA6NG13 374 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 RGS14O43566 566 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 ULK1O75385 1050 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 ABRAXAS2Q15018 415 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 SMU1Q2TAY7 513 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 REP15Q6BDI9 236 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 FUNDC1Q8IVP5 155 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 SFRP1Q8N474 314 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 PPP3R2Q96LZ3 170 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 TEX101Q9BY14 249 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 BRINP2Q9C0B6 783 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 DCLRE1BQ9H816 532 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 WDR41Q9HAD4 459 aa21.44■■□□□ 1.02
PTPN13-205ENST00000502971 ZFR2Q9UPR6 939 aaKnown RBP21.44■■□□□ 1.02
PTPN13-205ENST00000502971 DNMT3AQ9Y6K1 912 aaPredicted RBP21.44■■□□□ 1.02
PTPN13-205ENST00000502971 MANBAO00462 879 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 LSM1O15116 133 aaKnown RBP21.43■■□□□ 1.02
PTPN13-205ENST00000502971 NRP2O60462 931 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 KRT6AP02538 564 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 KRT6BP04259 564 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 COL9A1P20849 921 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 KRT6CP48668 564 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 MTTPP55157 894 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 PFN3P60673 137 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 ACTR3P61158 418 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 EMX2Q04743 252 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 PDCD4Q53EL6 469 aaKnown RBP21.43■■□□□ 1.02
PTPN13-205ENST00000502971 C1orf146Q5VVC0 180 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 NEK5Q6P3R8 708 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 TRIM46Q7Z4K8 759 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 ENDOVQ8N8Q3 282 aaKnown RBP21.43■■□□□ 1.02
PTPN13-205ENST00000502971 L3MBTL4Q8NA19 623 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 FNDC5Q8NAU1 212 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 OR9I1Q8NGQ6 314 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 TSPEARQ8WU66 669 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 USP7Q93009 1102 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 C1QTNF2Q9BXJ5 285 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 KLQ9UEF7 1012 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 LIMD1Q9UGP4 676 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 SLC22A14Q9Y267 594 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 TMEM98Q9Y2Y6 226 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 GPR89AB7ZAQ6 455 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 FBP2O00757 339 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 GPR89BP0CG08 455 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 C7P10643 843 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 GLULP15104 373 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 BDKRB1P46663 353 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 DIO3P55073 304 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 SGCGQ13326 291 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 LRP8Q14114 963 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms