RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GAREM2Q75VX8 874 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 STK32CQ86UX6 486 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 TCEAL8Q8IYN2 117 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 PHACTR4Q8IZ21 702 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 HS3ST5Q8IZT8 346 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CLEC4FQ8N1N0 589 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 SLC39A11Q8N1S5 342 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 C10orf111Q8N326 155 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CBARPQ8N350 705 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 GLB1L3Q8NCI6 653 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 SLAIN1Q8ND83 568 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 OR2AP1Q8NGE2 309 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 B4GALNT2Q8NHY0 566 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 SLC22A17Q8WUG5 538 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 OR52E6Q96RD3 313 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 POLR1BQ9H9Y6 1135 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CXorf21Q9HAI6 301 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ABCB8Q9NUT2 735 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 C1orf109Q9NX04 203 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ASIC5Q9NY37 505 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CFAP97Q9P2B7 532 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 IFT80Q9P2H3 777 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ADGRE2Q9UHX3 823 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 DLGAP4Q9Y2H0 992 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 KRT87PA6NCN2 255 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 GSTA4O15217 222 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 GMNNO75496 209 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 B3GALT4O96024 378 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 PDYNP01213 254 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 CKMP06732 381 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 THRBP10828 461 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 BCKDHAP12694 445 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 SRCP12931 536 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 GABRR2P28476 465 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 POLR2IP36954 125 aaKnown RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 NSG1P42857 185 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 TTLL9Q3SXZ7 439 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ATP13A5Q4VNC0 1218 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 RUNDC3AQ59EK9 446 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 CCNYL2Q5T2Q4 361 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 FAM117BQ6P1L5 589 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 KCTD8Q6ZWB6 473 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 NECAB2Q7Z6G3 386 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 AADATQ8N5Z0 425 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 LEMD2Q8NC56 503 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 EZH1Q92800 747 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 AURKBQ96GD4 344 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 LYSMD1Q96S90 227 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 DCUN1D5Q9BTE7 237 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 LTB4R2Q9NPC1 389 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 MRPL17Q9NRX2 175 aaKnown RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ARL15Q9NXU5 204 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 KCTD5Q9NXV2 234 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 PKD2L2Q9NZM6 624 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 LSM7Q9UK45 103 aaKnown RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 PDE10AQ9Y233 779 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 NUP214P35658 2090 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ELOVL7A1L3X0 281 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ZNF701M0R085 212 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 CXCR6O00574 342 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ATE1O95260 518 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 CLDN9O95484 217 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 URODP06132 367 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ANXA5P08758 320 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 STT3AP46977 705 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 RPIAP49247 311 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 HLCSP50747 726 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 PTSQ03393 145 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 NEDD8Q15843 81 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 LRRC73Q5JTD7 316 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ANKRD34AQ69YU3 496 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 METTL2BQ6P1Q9 378 aaKnown RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 GCNT7Q6ZNI0 430 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 GALNT13Q8IUC8 556 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 HS6ST3Q8IZP7 471 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 FAM162AQ96A26 154 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 SLC47A1Q96FL8 570 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 CAPNS2Q96L46 248 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ZNF558Q96NG5 402 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 UGT2B28Q9BY64 529 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 SLC29A3Q9BZD2 475 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 NAA50Q9GZZ1 169 aaKnown RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 PAIP1Q9H074 479 aaKnown RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 TOR3AQ9H497 397 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 SLC32A1Q9H598 525 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ACTR8Q9H981 624 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 SMURF2Q9HAU4 748 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 SERHLQ9NQF3 203 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 ZDHHC3Q9NYG2 299 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 KIAA1522Q9P206 1035 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 INVSQ9Y283 1065 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 PCDHB14Q9Y5E9 798 aa9.63□□□□□ -0.87
CLIP1-204ENST00000501271 HELZP42694 1942 aaKnown RBP9.63□□□□□ -0.87
CLIP1-204ENST00000501271 G3V2T6 193 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 H3BMQ9 156 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 TEX28O15482 410 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PRKD3O94806 890 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 CST1P01037 141 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms