RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 FAM159BA6NKW6 160 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 BTN3A3O00478 584 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 BTN3A1O00481 513 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 KIF1CO43896 1103 aaKnown RBP16.27■□□□□ 0.2
PRKCB-210ENST00000498739 TNFSF15O95150 251 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 C1orf105O95561 183 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 TPBGLP0DKB5 382 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 CBSLP0DN79 551 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 ENO3P13929 434 aaPredicted RBP16.27■□□□□ 0.2
PRKCB-210ENST00000498739 SAT1P21673 171 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 MCM3P25205 808 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 RBMS1P29558 406 aaKnown RBP16.27■□□□□ 0.2
PRKCB-210ENST00000498739 CBSP35520 551 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 SEPHS1P49903 392 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 MAPK10P53779 464 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 TIAL1Q01085 375 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKCB-210ENST00000498739 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
PRKCB-210ENST00000498739 KYNUQ16719 465 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 CACHD1Q5VU97 1274 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 CYS1Q717R9 158 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 ZC3HC1Q86WB0 502 aaKnown RBP16.27■□□□□ 0.2
PRKCB-210ENST00000498739 LSMEM2Q8N112 164 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 PRR11Q96HE9 360 aaPredicted RBP16.27■□□□□ 0.2
PRKCB-210ENST00000498739 NINJ2Q9NZG7 142 aa16.27■□□□□ 0.2
PRKCB-210ENST00000498739 FAM95CA0A1B0GW59 222 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 EFCAB7A8K855 629 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 MATN2O00339 956 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 TOX3O15405 576 aaPredicted RBP16.26■□□□□ 0.19
PRKCB-210ENST00000498739 MATN4O95460 622 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 C1QAP02745 245 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 ANKRD34CP0C6C1 535 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 MPC1LP0DKB6 136 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 CCL4P13236 92 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 PHBP35232 272 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 CCNFP41002 786 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 ETV5P41161 510 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 SKIV2L2P42285 1042 aaKnown RBP16.26■□□□□ 0.19
PRKCB-210ENST00000498739 RGS4P49798 205 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 KBTBD12Q3ZCT8 623 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 CCSMST1Q4G0I0 132 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 NEK10Q6ZWH5 1172 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 PIWIL4Q7Z3Z4 852 aaKnown RBP16.26■□□□□ 0.19
PRKCB-210ENST00000498739 PRSS42Q7Z5A4 293 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 FAM129CQ86XR2 697 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 ADGRF3Q8IZF5 1079 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 PPM1NQ8N819 430 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 MAGEC3Q8TD91 643 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 ZCCHC14Q8WYQ9 949 aaKnown RBP16.26■□□□□ 0.19
PRKCB-210ENST00000498739 RAD51AP1Q96B01 352 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 MAP3K3Q99759 626 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 OLFM1Q99784 485 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 CPNE1Q99829 537 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 CDC42EP4Q9H3Q1 356 aaKnown RBP16.26■□□□□ 0.19
PRKCB-210ENST00000498739 RHOJQ9H4E5 214 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 ZNF768Q9H5H4 540 aaKnown RBP16.26■□□□□ 0.19
PRKCB-210ENST00000498739 OCIAD1Q9NX40 245 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 SLC39A10Q9ULF5 831 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 VWA7Q9Y334 891 aa16.26■□□□□ 0.19
PRKCB-210ENST00000498739 PIPSLA2A3N6 862 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 TMEM8BA6NDV4 472 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 C2orf74A8MZ97 194 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 ITGA2BP08514 1039 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 CD9P21926 228 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 FDXRP22570 491 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 PKLRP30613 574 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 DEKP35659 375 aaKnown RBP16.25■□□□□ 0.19
PRKCB-210ENST00000498739 RAB28P51157 221 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 KPNA2P52292 529 aaKnown RBP16.25■□□□□ 0.19
PRKCB-210ENST00000498739 PGGT1BP53609 377 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 GRB7Q14451 532 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 EFTUD2Q15029 972 aaKnown RBP eCLIP16.25■□□□□ 0.19
PRKCB-210ENST00000498739 PAQR3Q6TCH7 311 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 RELL1Q8IUW5 271 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 EEF1AKMT1Q8WVE0 214 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 VPS39Q96JC1 886 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 SLC46A1Q96NT5 459 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 IL17FQ96PD4 163 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 CD180Q99467 661 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 ACTR10Q9NZ32 417 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 DKK4Q9UBT3 224 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 POMT2Q9UKY4 750 aa16.25■□□□□ 0.19
PRKCB-210ENST00000498739 IGHV5-51A0A0C4DH38 117 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 KRT87PA6NCN2 255 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 TLCD2A6NGC4 264 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 ARHGEF33A8MVX0 844 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 EIF3FO00303 357 aaPredicted RBP16.24■□□□□ 0.19
PRKCB-210ENST00000498739 RASGRF2O14827 1237 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 PSIP1O75475 530 aaKnown RBP16.24■□□□□ 0.19
PRKCB-210ENST00000498739 DXOO77932 396 aaKnown RBP16.24■□□□□ 0.19
PRKCB-210ENST00000498739 CATP04040 527 aaKnown RBP16.24■□□□□ 0.19
PRKCB-210ENST00000498739 CAPNS1P04632 268 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 CHRM5P08912 532 aaPredicted RBP16.24■□□□□ 0.19
PRKCB-210ENST00000498739 FGF3P11487 239 aaPredicted RBP16.24■□□□□ 0.19
PRKCB-210ENST00000498739 CDH3P22223 829 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 GP5P40197 560 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 TBC1D25Q3MII6 688 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 UBAP2Q5T6F2 1119 aaKnown RBP16.24■□□□□ 0.19
PRKCB-210ENST00000498739 LRRC8EQ6NSJ5 796 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 FBXO38Q6PIJ6 1188 aa16.24■□□□□ 0.19
PRKCB-210ENST00000498739 IGF2-ASQ6U949 168 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms