RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 APOLD1Q96LR9 279 aa17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 SH3GL2Q99962 352 aa17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 SLC40A1Q9NP59 571 aa17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 IGSF5Q9NSI5 407 aa17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 SCHIP1Q9P0W5 487 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 SIRPGQ9P1W8 387 aa17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 ZNF624Q9P2J8 865 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 LNPEPQ9UIQ6 1025 aa17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 RUVBL2Q9Y230 463 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 OARD1Q9Y530 152 aa17.11■□□□□ 0.33
CTDSP1-215ENST00000498160 ARHGEF17Q96PE2 2063 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 A0A1W2PPM1 405 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 HMGB1P1B2RPK0 211 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 MYO1CO00159 1063 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 MATN2O00339 956 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 TRIM38O00635 465 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 KERAO60938 352 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 S100BP04271 92 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 CKMT1AP12532 417 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 CD59P13987 128 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 TFEBP19484 476 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 SHMT2P34897 504 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 HNMTP50135 292 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 NR1D2Q14995 579 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 CLPPQ16740 277 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 PROX2Q3B8N5 592 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 PPM1JQ5JR12 505 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 TMEM26Q6ZUK4 368 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 ZNF438Q7Z4V0 828 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 WDR48Q8TAF3 677 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 NXNL1Q96CM4 212 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 CCDC138Q96M89 665 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 SLC38A3Q99624 504 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 MRPL46Q9H2W6 279 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 SLC32A1Q9H598 525 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 RNF112Q9ULX5 631 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 WDFY4Q6ZS81 3184 aa17.1■□□□□ 0.33
CTDSP1-215ENST00000498160 EME2A4GXA9 379 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 ARHGEF33A8MVX0 844 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 AGPSO00116 658 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 EML2O95834 649 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 GP1BAP07359 652 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 ANXA5P08758 320 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 CDK4P11802 303 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 CKMT2P17540 419 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 TAC1P20366 129 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 GPLD1P80108 840 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 ILKQ13418 452 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 PLCL1Q15111 1095 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 HSP90B2PQ58FF3 399 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 SBSNQ6UWP8 590 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 SH2D5Q6ZV89 423 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 ISCA2Q86U28 154 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 GPSM1Q86YR5 675 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 OR5AR1Q8NGP9 310 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 OR9A1PQ8NGU1 263 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 SCYL1Q96KG9 808 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 CNDP2Q96KP4 475 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 CAMK1GQ96NX5 476 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 PHOX2BQ99453 314 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 DPYSL5Q9BPU6 564 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 NUDT4Q9NZJ9 180 aa17.09■□□□□ 0.33
CTDSP1-215ENST00000498160 NPEPPSL1A6NEC2 478 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 GOLGA8RI6L899 631 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 FKBP9O95302 570 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 CCND1P24385 295 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 RAB28P51157 221 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 MAZP56270 477 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 IRF9Q00978 393 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 TSNQ15631 228 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 PPP1R3AQ16821 1122 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 ANKS6Q68DC2 871 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 BANPQ8N9N5 519 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 HMGCLL1Q8TB92 370 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 RDH11Q8TC12 318 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 LCN9Q8WX39 176 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 TLCD1Q96CP7 247 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 CCDC126Q96EE4 140 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 ATP6V1G3Q96LB4 118 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 HGH1Q9BTY7 390 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 ALG9Q9H6U8 611 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 MED4Q9NPJ6 270 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 ARL15Q9NXU5 204 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 OR6C2Q9NZP2 312 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 LRIT1Q9P2V4 623 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 PDE10AQ9Y233 779 aa17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 CFAP20Q9Y6A4 193 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-215ENST00000498160 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 CDC7O00311 574 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 TM9SF1O15321 606 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 TNFSF14O43557 240 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 SMIM24O75264 130 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 IPO13O94829 963 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 TPBGLP0DKB5 382 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 CSRP1P21291 193 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 ACP1P24666 158 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 SLC18A1P54219 525 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 NAA20P61599 178 aa17.07■□□□□ 0.32
CTDSP1-215ENST00000498160 DLG1Q12959 904 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms