RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 INPP4AQ96PE3 977 aaPredicted RBP4.44□□□□□ -1.7
VPS36-206ENST00000497149 EPYCQ99645 322 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 PSD2Q9BQI7 771 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 SLC25A23Q9BV35 468 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 Q9N2K0 584 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 ACAD8Q9UKU7 415 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 MTUS1Q9ULD2 1270 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 ICAM5Q9UMF0 924 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 NEMP2A6NFY4 417 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 ZNF500O60304 480 aaPredicted RBP4.43□□□□□ -1.7
VPS36-206ENST00000497149 RNASEH1O60930 286 aaKnown RBP4.43□□□□□ -1.7
VPS36-206ENST00000497149 SMIM18P0DKX4 95 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 HOXB6P17509 224 aaKnown RBP4.43□□□□□ -1.7
VPS36-206ENST00000497149 GNAZP19086 355 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 MAT1AQ00266 395 aaKnown RBP4.43□□□□□ -1.7
VPS36-206ENST00000497149 ACSM1Q08AH1 577 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 SYT14P1Q58G82 188 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 STPG1Q5TH74 334 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 KRT39Q6A163 491 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 PRR27Q6MZM9 219 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 MFSD12Q6NUT3 480 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 SLC26A9Q7LBE3 791 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 NR2C2APQ86WQ0 139 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 CFAP206Q8IYR0 622 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 CAMKVQ8NCB2 501 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 NPEPL1Q8NDH3 523 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 OLIG1Q8TAK6 271 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 IRGQQ8WZA9 623 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 HSD17B8Q92506 261 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 SYN2Q92777 582 aaPredicted RBP4.43□□□□□ -1.7
VPS36-206ENST00000497149 SLC47A1Q96FL8 570 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 ZNF354BQ96LW1 612 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 FER1L6-AS2Q96M78 137 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 ZMAT2Q96NC0 199 aaKnown RBP4.43□□□□□ -1.7
VPS36-206ENST00000497149 FEVQ99581 238 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 ZNF334Q9HCZ1 680 aaPredicted RBP4.43□□□□□ -1.7
VPS36-206ENST00000497149 COQ3Q9NZJ6 369 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 FLT1P17948 1338 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 PCDH11YQ9BZA8 1340 aa4.43□□□□□ -1.7
VPS36-206ENST00000497149 TSPY2A6NKD2 308 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 DUXAA6NLW8 204 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 RECQL5O94762 991 aaPredicted RBP4.42□□□□□ -1.7
VPS36-206ENST00000497149 ZNF432O94892 652 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 TSHBP01222 138 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 ATP5BP06576 529 aaKnown RBP4.42□□□□□ -1.7
VPS36-206ENST00000497149 QDPRP09417 244 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 TSPY3P0CV98 308 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 TSPY8P0CW00 308 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 IGHV4-38-2P0DP08 117 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 CYP11B2P19099 503 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 PTPN3P26045 913 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 CCR10P46092 362 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 ASCL1P50553 236 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 MAPK12P53778 367 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 CDH11P55287 796 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 POLR2LP62875 67 aaKnown RBP4.42□□□□□ -1.7
VPS36-206ENST00000497149 PHEXP78562 749 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 TSPY1Q01534 308 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 LGALS3BPQ08380 585 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 PPIGQ13427 754 aaKnown RBP eCLIP4.42□□□□□ -1.71e-7■□□□□ 8.8
VPS36-206ENST00000497149 HYAL4Q2M3T9 481 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 KLHL22Q53GT1 634 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 WDR38Q5JTN6 314 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 TMEM139Q8IV31 216 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 MFN1Q8IWA4 741 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 OR1J1Q8NGS3 322 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 GRHL3Q8TE85 626 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 CCDC107Q8WV48 283 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 ROBO4Q8WZ75 1007 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 ZNF558Q96NG5 402 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 MUS81Q96NY9 551 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 NODALQ96S42 347 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 FAM129AQ9BZQ8 928 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 BICC1Q9H694 974 aaKnown RBP4.42□□□□□ -1.7
VPS36-206ENST00000497149 A4GALTQ9NPC4 353 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 ECHDC1Q9NTX5 307 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.42□□□□□ -1.7
VPS36-206ENST00000497149 RNF150Q9ULK6 438 aa4.42□□□□□ -1.7
VPS36-206ENST00000497149 EIF5BO60841 1220 aaKnown RBP4.41□□□□□ -1.7
VPS36-206ENST00000497149 SLC22A3O75751 556 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 PIGNO95427 931 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 CAVIN2O95810 425 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 PRSS1P07477 247 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 INHBAP08476 426 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 LIFP15018 202 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 EEF1B2P24534 225 aaKnown RBP4.41□□□□□ -1.7
VPS36-206ENST00000497149 PTAFRP25105 342 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 PDX1P52945 283 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 LINC01547P58512 204 aaPredicted RBP4.41□□□□□ -1.7
VPS36-206ENST00000497149 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 PHLDA2Q53GA4 152 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 DCAF10Q5QP82 559 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 ERN2Q76MJ5 926 aaKnown RBP4.41□□□□□ -1.7
VPS36-206ENST00000497149 MARK2Q7KZI7 788 aaKnown RBP4.41□□□□□ -1.7
VPS36-206ENST00000497149 BHLHA9Q7RTU4 235 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 TRMT1LQ7Z2T5 733 aaKnown RBP4.41□□□□□ -1.7
VPS36-206ENST00000497149 NUP54Q7Z3B4 507 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 NUDT13Q86X67 352 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 DNAJC22Q8N4W6 341 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 KIF18AQ8NI77 898 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms