RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 GJA1P17302 382 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 EFNA1P20827 205 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-212ENST00000496458 TAF6P49848 677 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 BMXP51813 675 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 PDX1P52945 283 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 TPD52P55327 224 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-212ENST00000496458 SNX16P57768 344 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 CDK3Q00526 305 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 TAF13Q15543 124 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 IGSF11Q5DX21 431 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 DHRS7BQ6IAN0 325 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-212ENST00000496458 ANKRD23Q86SG2 305 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 SCML4Q8N228 414 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 AFAP1Q8N556 730 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 TRIML1Q8N9V2 468 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 OR5M8Q8NGP6 311 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 OR2T11Q8NH01 316 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 OR2T6Q8NHC8 308 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 MRGPRDQ8TDS7 321 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 NEK1Q96PY6 1258 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 CDRT15Q96T59 188 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 LMF2Q9BU23 707 aaKnown RBP5.02□□□□□ -1.61
SF3B1-212ENST00000496458 PSD3Q9NYI0 1048 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 KLHL8Q9P2G9 620 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-212ENST00000496458 GRIP1Q9Y3R0 1128 aa5.02□□□□□ -1.61
SF3B1-212ENST00000496458 A0A1W2PN81 502 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 SLCO1B7G3V0H7 640 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 FIBPO43427 364 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 PRKRAO75569 313 aaKnown RBP5.01□□□□□ -1.61
SF3B1-212ENST00000496458 AP2A2O94973 939 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 RAF1P04049 648 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CSH1P0DML2 217 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CSH2P0DML3 217 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 TRIM21P19474 475 aaKnown RBP5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CA4P22748 312 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CHRNA7P36544 502 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 NKX2-1P43699 371 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-212ENST00000496458 PPARDQ03181 441 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 PRKCZQ05513 592 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CHAF1BQ13112 559 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 NR1D2Q14995 579 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 TOMM20Q15388 145 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 ALDH1L2Q3SY69 923 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 FAM133BQ5BKY9 247 aaKnown RBP5.01□□□□□ -1.61
SF3B1-212ENST00000496458 KRT79Q5XKE5 535 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 ITPRIPL1Q6GPH6 555 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 C16orf54Q6UWD8 224 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 Q6ZSR9 355 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CEP57Q86XR8 500 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CFAP206Q8IYR0 622 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 ZNF611Q8N823 705 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 OR13J1Q8NGT2 312 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 MOSPD2Q8NHP6 518 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 PKNOX2Q96KN3 472 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 LINC00479Q96M42 142 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 LAT2Q9GZY6 243 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 S1PR5Q9H228 398 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 TBC1D17Q9HA65 648 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 TBC1D22BQ9NU19 505 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 PLCXD1Q9NUJ7 323 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 BARHL2Q9NY43 387 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 ZDHHC2Q9UIJ5 367 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 MTUS1Q9ULD2 1270 aa5.01□□□□□ -1.61
SF3B1-212ENST00000496458 CCDC88BA6NC98 1476 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 BICDL2A1A5D9 508 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 ADAMDEC1O15204 470 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 MED24O75448 989 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 TSPAN9O75954 239 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 BCL10O95999 233 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 B3GALT5-AS1P59052 145 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 PSMC6P62333 389 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 WTAPQ15007 396 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 TEX38Q6PEX7 206 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 TMPRSS11FQ6ZWK6 438 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 COMMD2Q86X83 199 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 CEP57L1Q8IYX8 460 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 MAPKAPK5-AS1Q8N8E1 139 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 MAPK1IP1LQ8NDC0 245 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 FGFBP3Q8TAT2 258 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 SUSD6Q92537 303 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 CALML4Q96GE6 196 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 ZDHHC18Q9NUE0 388 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 TUBE1Q9UJT0 475 aa5□□□□□ -1.61
SF3B1-212ENST00000496458 LAMC3Q9Y6N6 1575 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 PDS5BQ9NTI5 1447 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 hCG_1807616A0A1W2PRN6 198 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 MAGEA11P43364 429 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 SLC6A12P48065 614 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 HNRNPDQ14103 355 aaKnown RBP4.99□□□□□ -1.61
SF3B1-212ENST00000496458 MEA1Q16626 185 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 RILPL1Q5EBL4 403 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 C1QTNF12Q5T7M4 302 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 ADIPOR2Q86V24 386 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 PIGZQ86VD9 579 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 LINC00346Q8IVM7 164 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 TAGAPQ8N103 731 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 ARHGAP24Q8N264 748 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 MCUQ8NE86 351 aa4.99□□□□□ -1.61
SF3B1-212ENST00000496458 OR4C3Q8NH37 302 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms