RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PVRP15151 417 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 CCR7P32248 378 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 KCNJ1P48048 391 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 TTPAP49638 278 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 CSE1LP55060 971 aaKnown RBP12.33□□□□□ -0.44
PTPRF-214ENST00000496043 ITGA1P56199 1179 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 BASP1P80723 227 aaKnown RBP12.33□□□□□ -0.44
PTPRF-214ENST00000496043 CDK16Q00536 496 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 HSPA14Q0VDF9 509 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 DNAJC21Q5F1R6 531 aaKnown RBP12.33□□□□□ -0.44
PTPRF-214ENST00000496043 PRAMEF17Q5VTA0 474 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 TCTN3Q6NUS6 607 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 CDHR3Q6ZTQ4 885 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 TMEM135Q86UB9 458 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 APLFQ8IW19 511 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-214ENST00000496043 GPR135Q8IZ08 494 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 DSELQ8IZU8 1212 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 OR2A14Q96R47 310 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 RUFY1Q96T51 708 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 AP1M1Q9BXS5 423 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 TRIM4Q9C037 500 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 IL22Q9GZX6 179 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 KLHL25Q9H0H3 589 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 ACTR5Q9H9F9 607 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-214ENST00000496043 CATSPERZQ9NTU4 200 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 TLK1Q9UKI8 766 aa12.33□□□□□ -0.44
PTPRF-214ENST00000496043 ISM1B1AKI9 464 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 PRMT5O14744 637 aaPredicted RBP12.32□□□□□ -0.44
PTPRF-214ENST00000496043 GPC4O75487 556 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 NDUFS3O75489 264 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 RFPL1O75677 317 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 RPN2P04844 631 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 APOA4P06727 396 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 TPBGLP0DKB5 382 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 UGT2B7P16662 529 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 AGXTP21549 392 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 RORAP35398 523 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 CASRP41180 1078 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 PMS2P54278 862 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 RPS18P62269 152 aaKnown RBP12.32□□□□□ -0.44
PTPRF-214ENST00000496043 TLE1Q04724 770 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 ABRQ12979 859 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 SEMA3AQ14563 771 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 KIR2DS3Q14952 304 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 PTRHD1Q6GMV3 140 aaKnown RBP12.32□□□□□ -0.44
PTPRF-214ENST00000496043 LCN10Q6JVE6 187 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 TTC23LQ6PF05 361 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 LDB1Q86U70 411 aaPredicted RBP12.32□□□□□ -0.44
PTPRF-214ENST00000496043 SLC22A15Q8IZD6 547 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 C19orf47Q8N9M1 422 aaKnown RBP12.32□□□□□ -0.44
PTPRF-214ENST00000496043 DPH2Q9BQC3 489 aaPredicted RBP12.32□□□□□ -0.44
PTPRF-214ENST00000496043 NLNQ9BYT8 704 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 CHRNA10Q9GZZ6 450 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 PCMTD2Q9NV79 361 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 SPHK1Q9NYA1 384 aa12.32□□□□□ -0.44
PTPRF-214ENST00000496043 A0A0J9YY10 115 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 IQCF5A8MTL0 148 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 KPNA5O15131 536 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 ZNF749O43361 778 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 AOAHP28039 575 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 CXCR5P32302 372 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 SARNPP82979 210 aaKnown RBP12.31□□□□□ -0.44
PTPRF-214ENST00000496043 KLRB1Q12918 225 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 TMED2Q15363 201 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 KYNUQ16719 465 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 SLC5A12Q1EHB4 618 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 ZNF789Q5FWF6 425 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 LRRC8BQ6P9F7 803 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 ASB18Q6ZVZ8 466 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 SDCCAG8Q86SQ7 713 aaPredicted RBP12.31□□□□□ -0.44
PTPRF-214ENST00000496043 TRIM73Q86UV7 250 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 LRRC6Q86X45 466 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 MPP5Q8N3R9 675 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 ENDOVQ8N8Q3 282 aaKnown RBP12.31□□□□□ -0.44
PTPRF-214ENST00000496043 TEX19Q8NA77 164 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 CFAP61Q8NHU2 1237 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 SLC22A18Q96BI1 424 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 PANX3Q96QZ0 392 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 KIFC1Q9BW19 673 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 SPRTNQ9H040 489 aaPredicted RBP12.31□□□□□ -0.44
PTPRF-214ENST00000496043 FAM60AQ9NP50 221 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 TREX1Q9NSU2 369 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 MARCH4Q9P2E8 410 aaPredicted RBP12.31□□□□□ -0.44
PTPRF-214ENST00000496043 PLAGL1Q9UM63 463 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 SNX7Q9UNH6 387 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 CDYLQ9Y232 598 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 TP53TG5Q9Y2B4 290 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 AP1M2Q9Y6Q5 423 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 SPTA1P02549 2419 aa12.31□□□□□ -0.44
PTPRF-214ENST00000496043 PFDN6O15212 129 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 OR2B3O76000 313 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 SLCO2B1O94956 709 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 CD63P08962 238 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 TPSB2P20231 275 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 MGAT1P26572 445 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 NMBRP28336 390 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 RAB28P51157 221 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 CCL11P51671 97 aa12.3□□□□□ -0.44
PTPRF-214ENST00000496043 CRADDP78560 199 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms