RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 INAFM1C9JVW0 142 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 SOCS6O14544 535 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 CNOT3O75175 753 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 USP1O94782 785 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF202O95125 648 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 TSPAN12O95859 305 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 TRBC1P01850 177 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 HOXD4P09016 255 aaPredicted RBP9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 IMPDH2P12268 514 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 CYP11B1P15538 503 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 CMA1P23946 247 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 MSX1P28360 303 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 HTR7P34969 479 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 LMAN1P49257 510 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 BPIFB4P59827 614 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 PMP22Q01453 160 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 CACNG1Q06432 222 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 RPE65Q16518 533 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 RALGPS1Q5JS13 557 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 FBXW10Q5XX13 1052 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 RHBDD2Q6NTF9 364 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 TMEM214Q6NUQ4 689 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ARHGAP36Q6ZRI8 547 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ADGRG6Q86SQ4 1221 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 TRAPPC5Q8IUR0 188 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ANKRD42Q8N9B4 389 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 GOT1L1Q8NHS2 421 aaPredicted RBP9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ASB5Q8WWX0 329 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 CCDC34Q96HJ3 373 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF599Q96NL3 588 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 MGME1Q9BQP7 344 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 SPATA16Q9BXB7 569 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 KCNJ16Q9NPI9 418 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 TIMMDC1Q9NPL8 285 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 IMP3Q9NV31 184 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 PTGFRNQ9P2B2 879 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF180Q9UJW8 692 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 ADAM21Q9UKJ8 722 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 POMT2Q9UKY4 750 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 LUC7L2Q9Y383 392 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 FHOD1Q9Y613 1164 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 HS3ST3B1Q9Y662 390 aa9.25□□□□□ -0.93
SMARCAL1-213ENST00000496037 CUBNO60494 3623 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 C1orf232A0A0U1RR37 186 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 NKX2-6A6NCS4 301 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 C2CD4BA6NLJ0 364 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 IDSB3KWA1 339 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 MATN2O00339 956 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 PRRG2O14669 202 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 PSMA7O14818 248 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 DAPK3O43293 454 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CTAG2O75638 210 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 OR2B3O76000 313 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CLDN7O95471 211 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 LSM8O95777 96 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 F10P00742 488 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 PDHA1P08559 390 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 POLR2CP19387 275 aaPredicted RBP9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 HLA-DPA1P20036 260 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 SPINT3P49223 89 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CTSCP53634 463 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 AIF1P55008 147 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 MAXP61244 160 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 XRCC4Q13426 336 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 PPP2R5EQ16537 467 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 RBBP7Q16576 425 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 DEFB113Q30KQ7 82 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 NKAIN1Q4KMZ8 207 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 KRTCAP3Q53RY4 240 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 COBLL1Q53SF7 1204 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF658Q5TYW1 1059 aaPredicted RBP9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 TAF3Q5VWG9 929 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 KIRREL2Q6UWL6 708 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 C3P1Q6ZMU1 363 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 RIPOR1Q6ZS17 1223 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CLYBLQ8N0X4 340 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CCHCR1Q8TD31 782 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CENPIQ92674 756 aaPredicted RBP9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 HAS2Q92819 552 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 SMIM14Q96QK8 99 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CRACR2AQ9BSW2 395 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 SAMSN1Q9NSI8 373 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 IRAK4Q9NWZ3 460 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 LRFN1Q9P244 771 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 DHCR7Q9UBM7 475 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 CFAP45Q9UL16 551 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 HPSEQ9Y251 543 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 SPEF1Q9Y4P9 236 aa9.24□□□□□ -0.93
SMARCAL1-213ENST00000496037 RGSL1A5PLK6 1076 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 CDK2AP1O14519 115 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 CDK14O94921 469 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 PRAMEF1O95521 474 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 PF4P02776 101 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 MTHFD1P11586 935 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 FDXRP22570 491 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 CHRNB4P30926 498 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 TFF3Q07654 80 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 ITKQ08881 620 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 STIM1Q13586 685 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 GTF2H3Q13889 308 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms