RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 VRK3Q8IV63 474 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 ZBTB2Q8N680 514 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 C19orf47Q8N9M1 422 aaKnown RBP17.44■□□□□ 0.38
YIPF4-204ENST00000495355 LMNTD1Q8N9Z9 388 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 C1orf54Q8WWF1 131 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 SEC14L1Q92503 715 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 ELMO1Q92556 727 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 HDAC10Q969S8 669 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 COL26A1Q96A83 441 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 LRRC45Q96CN5 670 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 CLIP3Q96DZ5 547 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 MENTQ9BUN1 341 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 ING2Q9H160 280 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 FANCEQ9HB96 536 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 SYTL2Q9HCH5 934 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 CASS4Q9NQ75 786 aa17.44■□□□□ 0.38
YIPF4-204ENST00000495355 CCDC88CQ9P219 2028 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 SHANK1Q9Y566 2161 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 NBPF19A0A087WUL8 3843 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 ZNF749O43361 778 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 PTMAP06454 111 aaKnown RBP17.43■□□□□ 0.38
YIPF4-204ENST00000495355 KLK3P07288 261 aaPredicted RBP17.43■□□□□ 0.38
YIPF4-204ENST00000495355 CHRM5P08912 532 aaPredicted RBP17.43■□□□□ 0.38
YIPF4-204ENST00000495355 LINC00523Q86TU6 105 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 SLC13A5Q86YT5 568 aaPredicted RBP17.43■□□□□ 0.38
YIPF4-204ENST00000495355 TEX19Q8NA77 164 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 SPC24Q8NBT2 197 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 OR5K2Q8NHB8 316 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 RANBP9Q96S59 729 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 IMPACTQ9P2X3 320 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 RIMKLBQ9ULI2 386 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 ASF1AQ9Y294 204 aa17.43■□□□□ 0.38
YIPF4-204ENST00000495355 PCDHGA9Q9Y5G4 932 aaKnown RBP17.43■□□□□ 0.38
YIPF4-204ENST00000495355 ERI2A8K979 691 aaKnown RBP17.42■□□□□ 0.38
YIPF4-204ENST00000495355 KLF7O75840 302 aaPredicted RBP17.42■□□□□ 0.38
YIPF4-204ENST00000495355 FTH1P02794 183 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 CBSLP0DN79 551 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 CYP2A7P20853 494 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 CDC25BP30305 580 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 CCR7P32248 378 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 CBSP35520 551 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 CCL11P51671 97 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 FOXL2P58012 376 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 UBAP2LQ14157 1087 aaKnown RBP17.42■□□□□ 0.38
YIPF4-204ENST00000495355 GRB7Q14451 532 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 NCF4Q15080 339 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 KCTD19Q17RG1 926 aaPredicted RBP17.42■□□□□ 0.38
YIPF4-204ENST00000495355 NADK2Q4G0N4 442 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 FAM20CQ8IXL6 584 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 TBC1D21Q8IYX1 336 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 SPRTNQ9H040 489 aaPredicted RBP17.42■□□□□ 0.38
YIPF4-204ENST00000495355 MARCH4Q9P2E8 410 aaPredicted RBP17.42■□□□□ 0.38
YIPF4-204ENST00000495355 ANKMY1Q9P2S6 941 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 SNX7Q9UNH6 387 aa17.42■□□□□ 0.38
YIPF4-204ENST00000495355 USP9YO00507 2555 aaPredicted RBP17.42■□□□□ 0.38
YIPF4-204ENST00000495355 HEATR9A2RTY3 570 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 IQCF5A8MTL0 148 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 E7EQ34 232 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 QSOX1O00391 747 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 CNOT3O75175 753 aaKnown RBP17.41■□□□□ 0.38
YIPF4-204ENST00000495355 IFNB1P01574 187 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 ZSCAN5DPP0CG00 497 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 STIP1P31948 543 aaKnown RBP17.41■□□□□ 0.38
YIPF4-204ENST00000495355 SHMT2P34897 504 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 FDFT1P37268 417 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 AFTPHQ6ULP2 937 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 LDB1Q86U70 411 aaPredicted RBP17.41■□□□□ 0.38
YIPF4-204ENST00000495355 RNF10Q8N5U6 811 aaKnown RBP17.41■□□□□ 0.38
YIPF4-204ENST00000495355 DNAAF3Q8N9W5 541 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 LINC01555Q8NAE3 123 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 SLC25A23Q9BV35 468 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 AP1M1Q9BXS5 423 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 CHRNA10Q9GZZ6 450 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 TDRKHQ9Y2W6 561 aaKnown RBP17.41■□□□□ 0.38
YIPF4-204ENST00000495355 TCAF1Q9Y4C2 921 aa17.41■□□□□ 0.38
YIPF4-204ENST00000495355 A0A0J9YY10 115 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 GPC4O75487 556 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 SORBS2O94875 1100 aaKnown RBP17.4■□□□□ 0.38
YIPF4-204ENST00000495355 TMEM63AO94886 807 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 OR56A5P0C7T3 313 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 ADRA1DP25100 572 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 PKLRP30613 574 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 GCGRP47871 477 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 UQCRFS1P47985 274 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 CSE1LP55060 971 aaKnown RBP17.4■□□□□ 0.38
YIPF4-204ENST00000495355 SNX1Q13596 522 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 ATP1A4Q13733 1029 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 ZNF449Q6P9G9 518 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 SLC22A15Q8IZD6 547 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 DNAJC22Q8N4W6 341 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 FDCSPQ8NFU4 85 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 OR4L1Q8NH43 312 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 SGSM3Q96HU1 749 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 GBP5Q96PP8 586 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 NUDT9Q9BW91 350 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 ACSS2Q9NR19 701 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 RAB6BQ9NRW1 208 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 OR6C2Q9NZP2 312 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 CIDEBQ9UHD4 219 aa17.4■□□□□ 0.38
YIPF4-204ENST00000495355 SERTAD3Q9UJW9 196 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms