RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TCN2P20062 427 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 MC1RQ01726 317 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 ABRQ12979 859 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 SPESP1Q6UW49 350 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 LRRC6Q86X45 466 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 OR8K5Q8NH50 307 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 GRK7Q8WTQ7 553 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 CATSPER2Q96P56 530 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 TRAPPC9Q96Q05 1148 aa32.16■■■□□ 2.74
CBX4-203ENST00000494546 KDM1AO60341 852 aa32.15■■■□□ 2.74
CBX4-203ENST00000494546 CHRM5P08912 532 aaPredicted RBP32.15■■■□□ 2.74
CBX4-203ENST00000494546 PAMP19021 973 aa32.15■■■□□ 2.74
CBX4-203ENST00000494546 RPS3P23396 243 aaKnown RBP eCLIP32.15■■■□□ 2.74
CBX4-203ENST00000494546 KIAA0930Q6ICG6 404 aaPredicted RBP32.15■■■□□ 2.74
CBX4-203ENST00000494546 TRIM73Q86UV7 250 aa32.15■■■□□ 2.74
CBX4-203ENST00000494546 MCUQ8NE86 351 aa32.15■■■□□ 2.74
CBX4-203ENST00000494546 TRIM56Q9BRZ2 755 aaKnown RBP32.15■■■□□ 2.74
CBX4-203ENST00000494546 XAB2Q9HCS7 855 aaKnown RBP32.15■■■□□ 2.74
CBX4-203ENST00000494546 SPHK1Q9NYA1 384 aa32.15■■■□□ 2.74
CBX4-203ENST00000494546 OR6C2Q9NZP2 312 aa32.15■■■□□ 2.74
CBX4-203ENST00000494546 USP27XA6NNY8 438 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 CES2O00748 559 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 CPNE3O75131 537 aaKnown RBP32.14■■■□□ 2.74
CBX4-203ENST00000494546 MLNP12872 115 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 UGT2B7P16662 529 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 FNTAP49354 379 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 ATP1A1-AS1Q5TC04 95 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 GSDMBQ8TAX9 411 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 CT55Q8WUE5 264 aa32.14■■■□□ 2.74
CBX4-203ENST00000494546 KALRNO60229 2985 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 SDR42E2A6NKP2 422 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 TMEM150CB9EJG8 249 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 PFDN6O15212 129 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 SLCO2B1O94956 709 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 OAS2P29728 719 aaKnown RBP32.13■■■□□ 2.73
CBX4-203ENST00000494546 FMO4P31512 558 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 DNASE1L3Q13609 305 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 CTSL3PQ5NE16 218 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 ARMC3Q5W041 872 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 OTOAQ7RTW8 1153 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 ZNF605Q86T29 641 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 ZNF669Q96BR6 464 aaPredicted RBP32.13■■■□□ 2.73
CBX4-203ENST00000494546 SERPINB12Q96P63 405 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 OR2A14Q96R47 310 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 AKIRIN1Q9H9L7 192 aaPredicted RBP32.13■■■□□ 2.73
CBX4-203ENST00000494546 SYTL2Q9HCH5 934 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 LATS2Q9NRM7 1088 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 CIDEBQ9UHD4 219 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 KCND3Q9UK17 655 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 PCDHB3Q9Y5E6 796 aa32.13■■■□□ 2.73
CBX4-203ENST00000494546 TERTO14746 1132 aaKnown RBP32.12■■■□□ 2.73
CBX4-203ENST00000494546 RPN2P04844 631 aa32.12■■■□□ 2.73
CBX4-203ENST00000494546 PPP1R7Q15435 360 aa32.12■■■□□ 2.73
CBX4-203ENST00000494546 TYSND1Q2T9J0 566 aa32.12■■■□□ 2.73
CBX4-203ENST00000494546 RNF187Q5TA31 235 aaPredicted RBP32.12■■■□□ 2.73
CBX4-203ENST00000494546 PRAMEF17Q5VTA0 474 aa32.12■■■□□ 2.73
CBX4-203ENST00000494546 OR1L3Q8NH93 324 aa32.12■■■□□ 2.73
CBX4-203ENST00000494546 LPGAT1Q92604 370 aa32.12■■■□□ 2.73
CBX4-203ENST00000494546 IL1RAPL1Q9NZN1 696 aa32.12■■■□□ 2.73
CBX4-203ENST00000494546 ISM1B1AKI9 464 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 KPNA5O15131 536 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 CCR10P46092 362 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 DHX34Q14147 1143 aaKnown RBP32.11■■■□□ 2.73
CBX4-203ENST00000494546 DEFB109BQ30KR1 87 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 ANKRD20A4Q4UJ75 823 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 NEPROQ6NW34 567 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 FAM199XQ6PEV8 388 aaPredicted RBP32.11■■■□□ 2.73
CBX4-203ENST00000494546 UNC5DQ6UXZ4 953 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 DCUN1D3Q8IWE4 304 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 SKA2Q8WVK7 121 aaPredicted RBP32.11■■■□□ 2.73
CBX4-203ENST00000494546 TCF12Q99081 682 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 CRYL1Q9Y2S2 319 aa32.11■■■□□ 2.73
CBX4-203ENST00000494546 FAM237BA0A1B0GVD1 139 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 MAGEB16A2A368 324 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 SFTPCP11686 197 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 TCP1P17987 556 aaKnown RBP32.1■■■□□ 2.73
CBX4-203ENST00000494546 OGNP20774 298 aaKnown RBP32.1■■■□□ 2.73
CBX4-203ENST00000494546 NFATC3Q12968 1075 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 ERV3-1Q14264 604 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 KYNUQ16719 465 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 CDHR3Q6ZTQ4 885 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 NAT8LQ8N9F0 302 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 C19orf47Q8N9M1 422 aaKnown RBP32.1■■■□□ 2.73
CBX4-203ENST00000494546 MR1Q95460 341 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 BIRC8Q96P09 236 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 MAD1L1Q9Y6D9 718 aa32.1■■■□□ 2.73
CBX4-203ENST00000494546 PKLRP30613 574 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 RAB28P51157 221 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 POLE2P56282 527 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 GPS2Q13227 327 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 CRTC2Q53ET0 693 aaPredicted RBP32.09■■■□□ 2.73
CBX4-203ENST00000494546 SLC38A9Q8NBW4 561 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 FLVCR1-AS1Q8TAF5 88 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 FAM136AQ96C01 138 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 PDLIM2Q96JY6 352 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 RUFY1Q96T51 708 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 DDX47Q9H0S4 455 aaKnown RBP32.09■■■□□ 2.73
CBX4-203ENST00000494546 SERTAD3Q9UJW9 196 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 PCDHGA6Q9Y5G7 932 aa32.09■■■□□ 2.73
CBX4-203ENST00000494546 A0A0J9YY10 115 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms