RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 NDUFS1P28331 727 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 LEPRP48357 1165 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 PPP1CAP62136 330 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 PLOD1Q02809 727 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 BOP1Q14137 746 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 BRD3Q15059 726 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 LONRF1Q17RB8 773 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 DNAJC21Q5F1R6 531 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 PHF19Q5T6S3 580 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 RNF187Q5TA31 235 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 ZNF470Q6ECI4 717 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 ZNF549Q6P9A3 640 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 PRSS42Q7Z5A4 293 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 DENND6AQ8IWF6 608 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 LMNTD2Q8IXW0 634 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 SLC22A15Q8IZD6 547 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 LSMEM2Q8N112 164 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 KRT222Q8N1A0 295 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 FBXO39Q8N4B4 442 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 JPH3Q8WXH2 748 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 ELMO1Q92556 727 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 TFGQ92734 400 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 LRRC39Q96DD0 335 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 AHCYL2Q96HN2 611 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 C9orf72Q96LT7 481 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 NRTNQ99748 197 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 ERP44Q9BS26 406 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 TRIM31Q9BZY9 425 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 B3GNT4Q9C0J1 378 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 INTS10Q9NVR2 710 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 SIDT1Q9NXL6 827 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 GNPTGQ9UJJ9 305 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 RAXQ9Y2V3 346 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 PCDHGA7Q9Y5G6 932 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 HEBP2Q9Y5Z4 205 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 MAD1L1Q9Y6D9 718 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 URB1O60287 2271 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 EPG5Q9HCE0 2579 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 A0A087WV48 116 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 UBA6A0AVT1 1052 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 OR5K3A6NET4 321 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 C9orf172C9J069 976 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 F8W8V4 182 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 NVLO15381 856 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 TOX3O15405 576 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 KIF1CO43896 1103 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 CPNE3O75131 537 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 NIPSNAP2O75323 286 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 NDUFS3O75489 264 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 TNFSF15O95150 251 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 TTC4O95801 387 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 ESR1P03372 595 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 FGF3P11487 239 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 AMD1P17707 334 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 ITGB6P18564 788 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 EIF2S3P41091 472 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 ELK3P41970 407 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 SLC1A2P43004 574 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 MAPK9P45984 424 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 EIF3BP55884 814 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 TNP2Q05952 138 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 CTBP1Q13363 440 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 FRG1Q14331 258 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 FASTKD3Q14CZ7 662 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 BBS9Q3SYG4 887 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 SPANXN3Q5MJ09 141 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 UNC5AQ6ZN44 842 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 MAATS1Q7Z4T9 603 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 SDCCAG8Q86SQ7 713 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 KCNMB4Q86W47 210 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 PLXDC1Q8IUK5 500 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 CNTN4Q8IWV2 1026 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 PDIK1LQ8N165 341 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 C2CD4AQ8NCU7 369 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 AGBL5Q8NDL9 886 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 PHC3Q8NDX5 983 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 ACVR1CQ8NER5 493 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 OR5AR1Q8NGP9 310 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 CALML6Q8TD86 181 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 KLHL6Q8WZ60 621 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 FGF11Q92914 225 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 PMEPA1Q969W9 287 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 ZNF837Q96EG3 531 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 PANX3Q96QZ0 392 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 CMKLR1Q99788 373 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 NAT9Q9BTE0 207 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 MENTQ9BUN1 341 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 ZNF768Q9H5H4 540 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 TFB2MQ9H5Q4 396 aaKnown RBP8.52□□□□□ -1.05
ITGB1-217ENST00000494395 MVB12BQ9H7P6 319 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 THSD1Q9NS62 852 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 WHRNQ9P202 907 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 GALPQ9UBC7 116 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 PISDQ9UG56 409 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 FBXO5Q9UKT4 447 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 SNX24Q9Y343 169 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 MRFAP1Q9Y605 127 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 COLEC10Q9Y6Z7 277 aa8.52□□□□□ -1.05
ITGB1-217ENST00000494395 ZFHX4Q86UP3 3567 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms