RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 OLFM1Q99784 485 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 MENTQ9BUN1 341 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 CDC42EP4Q9H3Q1 356 aaKnown RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 TRMT6Q9UJA5 497 aaKnown RBP13.15□□□□□ -0.3
COL1A1-208ENST00000494334 PLAGL1Q9UM63 463 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 ICKQ9UPZ9 632 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 LOXL2Q9Y4K0 774 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 PCDHGA8Q9Y5G5 932 aa13.15□□□□□ -0.3
COL1A1-208ENST00000494334 WDFY3Q8IZQ1 3526 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 BTN3A1O00481 513 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 TOX3O15405 576 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-208ENST00000494334 MPC1LP0DKB6 136 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CBSLP0DN79 551 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CCL4P13236 92 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 ENO3P13929 434 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-208ENST00000494334 ITIH1P19827 911 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 MCM3P25205 808 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 STX2P32856 288 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CSTF2P33240 577 aaKnown RBP eCLIP13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CBSP35520 551 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 BDKRB1P46663 353 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 PRKAA1Q13131 559 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CCSMST1Q4G0I0 132 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 TTC23LQ6PF05 361 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 PAQR3Q6TCH7 311 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CTAGE3PQ8IX95 158 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 ADGRF3Q8IZF5 1079 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 AGBL5Q8NDL9 886 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 EEF1AKMT1Q8WVE0 214 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 NXPE2Q96DL1 559 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 ELMO2Q96JJ3 720 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 SLC46A1Q96NT5 459 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 MAP3K3Q99759 626 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CPNE1Q99829 537 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 RHOJQ9H4E5 214 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-208ENST00000494334 SEMA5BQ9P283 1151 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 CIDEBQ9UHD4 219 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 ASPMQ8IZT6 3477 aa13.14□□□□□ -0.31
COL1A1-208ENST00000494334 FAM95CA0A1B0GW59 222 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 EIF3FO00303 357 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 KDM1AO60341 852 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 BRINP1O60477 761 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 PSIP1O75475 530 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 RASSF9O75901 435 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 DXOO77932 396 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 ANKRD34CP0C6C1 535 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 JMJD7P0C870 316 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 SHMT2P34897 504 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 GP5P40197 560 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 CCNFP41002 786 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 ETV5P41161 510 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 SEPHS1P49903 392 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 KPNA2P52292 529 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 CACHD1Q5VU97 1274 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 ARMC6Q6NXE6 501 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 IGF2-ASQ6U949 168 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 PIWIL4Q7Z3Z4 852 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 PRSS42Q7Z5A4 293 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 LSMEM2Q8N112 164 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 PPM1NQ8N819 430 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 MAGEC3Q8TD91 643 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 ASB11Q8WXH4 323 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 VPS39Q96JC1 886 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 IL17FQ96PD4 163 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 TWSG1Q9GZX9 223 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 OCIAD1Q9NX40 245 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 OR6C2Q9NZP2 312 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 TXNDC16Q9P2K2 825 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 DKK4Q9UBT3 224 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 PISDQ9UG56 409 aa13.13□□□□□ -0.31
COL1A1-208ENST00000494334 MTO1Q9Y2Z2 717 aaKnown RBP13.13□□□□□ -0.31
COL1A1-208ENST00000494334 IGHV5-51A0A0C4DH38 117 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 PIPSLA2A3N6 862 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 GSAPA4D1B5 854 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 KRT87PA6NCN2 255 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 EFCAB7A8K855 629 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 ARHGEF33A8MVX0 844 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 GFYI3L273 518 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 MATN2O00339 956 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 RASGRF2O14827 1237 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 FAM155BO75949 473 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 TNFSF15O95150 251 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 TSPAN12O95859 305 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 FGF3P11487 239 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-208ENST00000494334 SAT1P21673 171 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
COL1A1-208ENST00000494334 PRDX3P30048 256 aaKnown RBP13.12□□□□□ -0.31
COL1A1-208ENST00000494334 PKLRP30613 574 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 PHBP35232 272 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 RGS4P49798 205 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 RAB28P51157 221 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 TAS2R39P59534 338 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
COL1A1-208ENST00000494334 SLMAPQ14BN4 828 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms