RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 NDUFS2O75306 463 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 EGFP01133 1207 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 ACAA1P09110 424 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 HOXD9P28356 352 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 CYLC1P35663 651 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 HNMTP50135 292 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 RPS24P62847 133 aaKnown RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 MESP2Q0VG99 397 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 PITRM1Q5JRX3 1037 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 FSTL4Q6MZW2 842 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 CASC4Q6P4E1 433 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 SUSD1Q6UWL2 747 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 FAM47EQ6ZV65 393 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 BMP8AQ7Z5Y6 402 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 CIR1Q86X95 450 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 ETFBKMTQ8IXQ9 262 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 KBTBD2Q8IY47 623 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 AHI1Q8N157 1196 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 PHTF2Q8N3S3 785 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF321PQ8N8H1 164 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 HJURPQ8NCD3 748 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 SLC24A4Q8NFF2 622 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF564Q8TBZ8 553 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 MYEOVQ96EZ4 313 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 LRFN3Q9BTN0 628 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 FRMD8P1Q9BZ68 369 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 VPS45Q9NRW7 570 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 SNX10Q9Y5X0 201 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 HS3ST4Q9Y661 456 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 TMEM191CA6NGB0 347 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 NCF1BA6NI72 391 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 NCF1CA8MVU1 366 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 VSTM5A8MXK1 200 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 I6L893 689 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 DNALI1O14645 258 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 ASNA1O43681 348 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CBR3O75828 277 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CRTAMO95727 393 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 DNTTP04053 509 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 APODP05090 189 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 DGKGP49619 791 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 ERFP50548 548 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 HNRNPKP61978 463 aaKnown RBP eCLIP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF252P-AS1Q0IIN9 211 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CDH18Q13634 790 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 LRRC32Q14392 662 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 ARHGAP19Q14CB8 494 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 SPA17Q15506 151 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TEAD4Q15561 434 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TMEM196Q5HYL7 178 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 MPP7Q5T2T1 576 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 UGT2A3Q6UWM9 527 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 Q6ZS52 159 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 NLRC3Q7RTR2 1065 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 KDELC2Q7Z4H8 507 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CROCCP2Q86T23 111 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 SFTPA1Q8IWL2 248 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CCDC185Q8N715 623 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TMEM105Q8N8V8 129 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 PIK3R3Q92569 461 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 BARD1Q99728 777 aaKnown RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 SLC19A3Q9BZV2 496 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 WDR12Q9GZL7 423 aaKnown RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TGIF2Q9GZN2 237 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 LMAN1LQ9HAT1 526 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 IFT46Q9NQC8 304 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 GDF3Q9NR23 364 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 APPL1Q9UKG1 709 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 VPS13AQ96RL7 3174 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 KMT2EQ8IZD2 1858 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 MYO15AQ9UKN7 3530 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TBC1D3BA6NDS4 549 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TMEM210A6NLX4 147 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 DYRK3O43781 588 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 ENDOD1O94919 500 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 KAT7O95251 611 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TNFAIP8O95379 198 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 DRD1P21728 446 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 BMI1P35226 326 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 EIF2DP41214 584 aaKnown RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 NUMBP49757 651 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CLCN5P51795 746 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 AUHQ13825 339 aaKnown RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 SPARCL1Q14515 664 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 KHDC1Q4VXA5 237 aaKnown RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 RABGAP1LQ5R372 815 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 NLRP8Q86W28 1048 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TDRPQ86YL5 185 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 DENND6BQ8NEG7 585 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TRPV3Q8NET8 790 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CENPIQ92674 756 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TLCD1Q96CP7 247 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 TBC1D10AQ9BXI6 508 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 Q9H521 79 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 CLEC4EQ9ULY5 219 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 MAN2B2Q9Y2E5 1009 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 KCNE2Q9Y6J6 123 aa11.37□□□□□ -0.59
BRCA1-222ENST00000493919 PQLC2LA1A4F0 135 aa11.36□□□□□ -0.59
BRCA1-222ENST00000493919 C12orf71A8MTZ7 269 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms