RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 PLIN4Q96Q06 1357 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 TACSTD2P09758 323 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 UGT1A3P35503 534 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 TSPAN5P62079 268 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 NAT8LQ8N9F0 302 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 OR10H4Q8NGA5 316 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 TFAP2BQ92481 460 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 KCTD7Q96MP8 289 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 PSKH2Q96QS6 385 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 EFCAB11Q9BUY7 163 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 POLR2J2Q9GZM3 115 aaKnown RBP19.76■□□□□ 0.75
RNF40-203ENST00000493683 PADI3Q9ULW8 664 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 IGLV3-22A0A075B6J6 115 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 MID1O15344 667 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 PGLSO95336 258 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 MT-ND1P03886 318 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 CCNHP51946 323 aaPredicted RBP19.76■□□□□ 0.75
RNF40-203ENST00000493683 CBFBQ13951 182 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 NAT16Q8N8M0 369 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 LCN9Q8WX39 176 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 CDH7Q9ULB5 785 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 GPR25O00155 361 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 PLOD2O00469 737 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 SCGNO76038 276 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 GBX2P52951 348 aaPredicted RBP19.76■□□□□ 0.75
RNF40-203ENST00000493683 SCRN3Q0VDG4 424 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 NUP54Q7Z3B4 507 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 OR10G2Q8NGC3 310 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 TVP23BQ9NYZ1 205 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 FKBP7Q9Y680 259 aa19.76■□□□□ 0.75
RNF40-203ENST00000493683 EME2A4GXA9 379 aaPredicted RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 ITGA10O75578 1167 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 RENP00797 406 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 RFWD3Q6PCD5 774 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 ZDHHC24Q6UX98 284 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 ADGRD2Q7Z7M1 963 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 IFT27Q9BW83 186 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 MKKSQ9NPJ1 570 aaPredicted RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 DNAAF2Q9NVR5 837 aaKnown RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 SPATA7Q9P0W8 599 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 PTBP2Q9UKA9 531 aaKnown RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 OR2AG2A6NM03 316 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 OR2B6P58173 313 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 COX18Q8N8Q8 333 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 OR2L5Q8NG80 312 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 KCNS3Q9BQ31 491 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 EBPLQ9BY08 206 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 SLC29A3Q9BZD2 475 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 ITM2CQ9NQX7 267 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 PCDHGC4Q9Y5F7 938 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 MT-CYBP00156 380 aaPredicted RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 ATP5A1P25705 553 aaKnown RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 GNALP38405 381 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 ATXN1P54253 815 aaKnown RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 TARDBPQ13148 414 aaKnown RBP eCLIP19.75■□□□□ 0.75
RNF40-203ENST00000493683 LRRC70Q7Z2Q7 622 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 PYROXD2Q8N2H3 581 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 OR7D4Q8NG98 312 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 CEP295NLQ96MC4 621 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 MARK1Q9P0L2 795 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 MKLN1Q9UL63 735 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 EOMESO95936 686 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 CD36P16671 472 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 IL7RP16871 459 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 MXD1Q05195 221 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 SCARB2Q14108 478 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 UBXN11Q5T124 520 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 THOC7Q6I9Y2 204 aaKnown RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 OR5T3Q8NGG3 340 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 NR4A3Q92570 626 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 SCGB3A2Q96PL1 93 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 ZNF639Q9UID6 485 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 FZD1Q9UP38 647 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 TMED5Q9Y3A6 229 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 EI24O14681 340 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 ACOX3O15254 700 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 PDCD4Q53EL6 469 aaKnown RBP19.75■□□□□ 0.75
RNF40-203ENST00000493683 ANKRD46Q86W74 232 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 WFIKKN2Q8TEU8 576 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 SIX2Q9NPC8 291 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 COPS7AQ9UBW8 275 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 SLC7A8Q9UHI5 535 aa19.75■□□□□ 0.75
RNF40-203ENST00000493683 LRRC72A6NJI9 287 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 RPP38P78345 283 aaKnown RBP19.74■□□□□ 0.75
RNF40-203ENST00000493683 FUT10Q6P4F1 479 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 HIPK3Q9H422 1215 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 USP29Q9HBJ7 922 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 SNTG1Q9NSN8 517 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 LSM1O15116 133 aaKnown RBP19.74■□□□□ 0.75
RNF40-203ENST00000493683 FOXN2P32314 431 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 ASPAP45381 313 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 CLCNKBP51801 687 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 TMEM220Q6QAJ8 160 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 ZNF548Q8NEK5 533 aaPredicted RBP19.74■□□□□ 0.75
RNF40-203ENST00000493683 GEMIN6Q8WXD5 167 aaKnown RBP19.74■□□□□ 0.75
RNF40-203ENST00000493683 PSMG2Q969U7 264 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 FBXW2Q9UKT8 454 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 ECHS1P30084 290 aa19.74■□□□□ 0.75
RNF40-203ENST00000493683 MTPNP58546 118 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms