RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PPP1R32Q7Z5V6 425 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 CUZD1Q86UP6 607 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 TMEM151BQ8IW70 566 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 RCOR2Q8IZ40 523 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 ZNF655Q8N720 491 aaPredicted RBP11.91□□□□□ -0.5
SAMM50-205ENST00000493621 OR2Y1Q8NGV0 311 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 TM9SF4Q92544 642 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 TFGQ92734 400 aaPredicted RBP11.91□□□□□ -0.5
SAMM50-205ENST00000493621 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.91□□□□□ -0.5
SAMM50-205ENST00000493621 GBP5Q96PP8 586 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 HEMGNQ9BXL5 484 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 VPS37BQ9H9H4 285 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 ZBTB20Q9HC78 741 aaPredicted RBP11.91□□□□□ -0.5
SAMM50-205ENST00000493621 ABHD10Q9NUJ1 306 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 IRAK4Q9NWZ3 460 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 ZDHHC3Q9NYG2 299 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 ICKQ9UPZ9 632 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 PCDHGA10Q9Y5H3 936 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 ALG6Q9Y672 507 aa11.91□□□□□ -0.5
SAMM50-205ENST00000493621 ZGRF1Q86YA3 2104 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 IGLV3-16A0A075B6K0 115 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 ZSCAN9O15535 394 aaPredicted RBP11.9□□□□□ -0.5
SAMM50-205ENST00000493621 CD63P08962 238 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 PRSS56P0CW18 603 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 GABRA4P48169 554 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 MARCKSL1P49006 195 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 RPA4Q13156 261 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 MSLNQ13421 630 aaPredicted RBP11.9□□□□□ -0.5
SAMM50-205ENST00000493621 PRPSAP1Q14558 356 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 TCEAL1Q15170 157 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 CYP2A13Q16696 494 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 GPR33Q49SQ1 333 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 NKAIN1Q4KMZ8 207 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 C1QL3Q5VWW1 255 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 UNC5AQ6ZN44 842 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 Q6ZS92 163 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 TAS2R42Q7RTR8 314 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 SERPINA9Q86WD7 417 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 TICAM1Q8IUC6 712 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.5
SAMM50-205ENST00000493621 KATNAL2Q8IYT4 538 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 CLDN19Q8N6F1 224 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 OR5AR1Q8NGP9 310 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 PROKR1Q8TCW9 393 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 PTERQ96BW5 349 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 OR2A14Q96R47 310 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 BARD1Q99728 777 aaKnown RBP11.9□□□□□ -0.5
SAMM50-205ENST00000493621 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 ATP13A2Q9NQ11 1180 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 AGPAT4Q9NRZ5 378 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 TXLNGQ9NUQ3 528 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 SPHK1Q9NYA1 384 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 AAR2Q9Y312 384 aaKnown RBP11.9□□□□□ -0.5
SAMM50-205ENST00000493621 POLEQ07864 2286 aa11.9□□□□□ -0.5
SAMM50-205ENST00000493621 SVILO95425 2214 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 APOC4-APOC2K7ER74 178 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 APOC2P02655 101 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 UMODP07911 640 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 CHRM5P08912 532 aaPredicted RBP11.89□□□□□ -0.51
SAMM50-205ENST00000493621 TPM1P09493 284 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 ITGA3P26006 1051 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 ACRV1P26436 265 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 TNFRSF8P28908 595 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 SHMT2P34897 504 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 SOX8P57073 446 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 SPARCL1Q14515 664 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 HIF1AQ16665 826 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 ANKRD20A2Q5SQ80 823 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 CCDC181Q5TID7 509 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 ANKRD20A1Q5TYW2 823 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 ANKRD20A3Q5VUR7 823 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 MRPL14Q6P1L8 145 aaKnown RBP11.89□□□□□ -0.51
SAMM50-205ENST00000493621 BBS12Q6ZW61 710 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 ST6GALNAC3Q8NDV1 305 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 DNAJC1Q96KC8 554 aaKnown RBP11.89□□□□□ -0.51
SAMM50-205ENST00000493621 TBL1YQ9BQ87 522 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 WDR77Q9BQA1 342 aaPredicted RBP11.89□□□□□ -0.51
SAMM50-205ENST00000493621 FERMT1Q9BQL6 677 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 INTUQ9ULD6 942 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 SRPK3Q9UPE1 567 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 ASF1AQ9Y294 204 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 TDRKHQ9Y2W6 561 aaKnown RBP11.89□□□□□ -0.51
SAMM50-205ENST00000493621 CSAG2Q9Y5P2 127 aa11.89□□□□□ -0.51
SAMM50-205ENST00000493621 TRBV5-4A0A0C4DH59 114 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 A0A0J9YY10 115 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 MACROD2A1Z1Q3 448 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 AGPSO00116 658 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 MFAP3LO75121 409 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 ALOX12BO75342 701 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 OTUD4Q01804 1114 aaKnown RBP11.88□□□□□ -0.51
SAMM50-205ENST00000493621 AIMP2Q13155 320 aaKnown RBP11.88□□□□□ -0.51
SAMM50-205ENST00000493621 BRD3Q15059 726 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 DENND5AQ6IQ26 1287 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 TLDC1Q6P9B6 456 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 KCNMB4Q86W47 210 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 CDKL3Q8IVW4 592 aaPredicted RBP11.88□□□□□ -0.51
SAMM50-205ENST00000493621 DNAJC22Q8N4W6 341 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 FLVCR1-AS1Q8TAF5 88 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 CCDC110Q8TBZ0 833 aa11.88□□□□□ -0.51
SAMM50-205ENST00000493621 ACTL9Q8TC94 416 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms