RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CSF2RBP32927 897 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 CLCN7P51798 805 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 GPLD1P80108 840 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 EFTUD2Q15029 972 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■□ 19.4
CTSA-209ENST00000493522 KBTBD12Q3ZCT8 623 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 FAM45BPQ6NSW5 357 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 PPM1NQ8N819 430 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 OR5AR1Q8NGP9 310 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 GIMAP7Q8NHV1 300 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 FAM45AQ8TCE6 357 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 TTC9Q92623 222 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 TFGQ92734 400 aaPredicted RBP11.28□□□□□ -0.6
CTSA-209ENST00000493522 ELMO2Q96JJ3 720 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 SLC46A1Q96NT5 459 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 NUDT22Q9BRQ3 303 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 TRIT1Q9H3H1 467 aaKnown RBP11.28□□□□□ -0.6
CTSA-209ENST00000493522 EPB41L1Q9H4G0 881 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 MVB12BQ9H7P6 319 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 UCK1Q9HA47 277 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 RDH14Q9HBH5 336 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 GALPQ9UBC7 116 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 SLC24A2Q9UI40 661 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 CORO1CQ9ULV4 474 aaPredicted RBP11.28□□□□□ -0.6
CTSA-209ENST00000493522 RUVBL2Q9Y230 463 aaKnown RBP11.28□□□□□ -0.6
CTSA-209ENST00000493522 CDYLQ9Y232 598 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 PCDHGA8Q9Y5G5 932 aa11.28□□□□□ -0.6
CTSA-209ENST00000493522 FAM95CA0A1B0GW59 222 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 NTN3O00634 580 aaPredicted RBP11.27□□□□□ -0.61
CTSA-209ENST00000493522 UBXN7O94888 489 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 SLCO2B1O94956 709 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 RPN2P04844 631 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 AMD1P17707 334 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 SAT1P21673 171 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 MCM3P25205 808 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 ACADLP28330 430 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 ATP5DP30049 168 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 MLLT3P42568 568 aaPredicted RBP11.27□□□□□ -0.61
CTSA-209ENST00000493522 BDKRB1P46663 353 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 CAPZBP47756 277 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 CDKN2DP55273 166 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 ABRQ12979 859 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 PRKG2Q13237 762 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 PDAP1Q13442 181 aaKnown RBP11.27□□□□□ -0.61
CTSA-209ENST00000493522 NAB1Q13506 487 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 LY6DQ14210 128 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 SLMAPQ14BN4 828 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 ACSBG2Q5FVE4 666 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 UBAP2Q5T6F2 1119 aaKnown RBP11.27□□□□□ -0.61
CTSA-209ENST00000493522 PHF19Q5T6S3 580 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 HECTD2Q5U5R9 776 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 UGT3A1Q6NUS8 523 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 USP53Q70EK8 1073 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 PIM3Q86V86 326 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 ZC3HC1Q86WB0 502 aaKnown RBP11.27□□□□□ -0.61
CTSA-209ENST00000493522 RELL1Q8IUW5 271 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 CPNE9Q8IYJ1 553 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 PHC3Q8NDX5 983 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 ACVR1CQ8NER5 493 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 CD200R1Q8TD46 325 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 RSC1A1Q92681 617 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 INPP5DQ92835 1189 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 VPS39Q96JC1 886 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 FOPNLQ96NB1 174 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 SLC30A3Q99726 388 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 CPNE1Q99829 537 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 RHOJQ9H4E5 214 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 KIR3DX1Q9H7L2 352 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 TAS2R13Q9NYV9 303 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
CTSA-209ENST00000493522 TDRKHQ9Y2W6 561 aaKnown RBP11.27□□□□□ -0.61
CTSA-209ENST00000493522 MED16Q9Y2X0 877 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 ENTPD2Q9Y5L3 495 aa11.27□□□□□ -0.61
CTSA-209ENST00000493522 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.61
CTSA-209ENST00000493522 SPTA1P02549 2419 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 K7ENP7 123 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 AGRPO00253 132 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 C1QAP02745 245 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 ENO3P13929 434 aaPredicted RBP11.26□□□□□ -0.61
CTSA-209ENST00000493522 FDXRP22570 491 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 TNFRSF8P28908 595 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 CD1CP29017 333 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 GP5P40197 560 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 PDX1P52945 283 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 INHBCP55103 352 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 GBX1Q14549 363 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 UAP1Q16222 522 aaPredicted RBP11.26□□□□□ -0.61
CTSA-209ENST00000493522 CLPPQ16740 277 aaPredicted RBP11.26□□□□□ -0.61
CTSA-209ENST00000493522 KLHL38Q2WGJ6 581 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 SNAP47Q5SQN1 464 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 IRGCQ6NXR0 463 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 KLHL35Q6PF15 583 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 INO80CQ6PI98 192 aaPredicted RBP11.26□□□□□ -0.61
CTSA-209ENST00000493522 FOXR1Q6PIV2 292 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 UNC5DQ6UXZ4 953 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 CCDC81Q6ZN84 652 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 B3GNT8Q7Z7M8 397 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 DCUN1D3Q8IWE4 304 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 TBC1D21Q8IYX1 336 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms