RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.36
HDAC3-213ENST00000492506 LPOP22079 712 aaPredicted RBP12.83□□□□□ -0.36
HDAC3-213ENST00000492506 IL4RP24394 825 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 ARL4AP40617 200 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 NIPAL4Q0D2K0 466 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 GPR18Q14330 331 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 KCNAB1Q14722 419 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 CHRNA6Q15825 494 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 ADGRG6Q86SQ4 1221 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF547Q8IVP9 402 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC3-213ENST00000492506 RBMXL3Q8N7X1 1067 aaKnown RBP12.83□□□□□ -0.36
HDAC3-213ENST00000492506 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
HDAC3-213ENST00000492506 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 MAML1Q92585 1016 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 ZDHHC12Q96GR4 267 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 OSGEPL1Q9H4B0 414 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 PCDH18Q9HCL0 1135 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 TRIM39Q9HCM9 518 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 ACSS2Q9NR19 701 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 IGSF5Q9NSI5 407 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC3-213ENST00000492506 POT1Q9NUX5 634 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 MTRF1LQ9UGC7 380 aaKnown RBP12.83□□□□□ -0.36
HDAC3-213ENST00000492506 TMED5Q9Y3A6 229 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 PCDHGB7Q9Y5F8 929 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 CELSR1Q9NYQ6 3014 aa12.83□□□□□ -0.36
HDAC3-213ENST00000492506 FER1L5A0AVI2 2057 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 OR52A4PA6NMU1 304 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 PFDN1O60925 122 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 TJP3O95049 919 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 CBX6O95503 412 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 TROVE2P10155 538 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDAC3-213ENST00000492506 SERPINB6P35237 376 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 PTGIRP43119 386 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 PHEXP78562 749 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 DHX9Q08211 1270 aaKnown RBP12.82□□□□□ -0.36
HDAC3-213ENST00000492506 ITKQ08881 620 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 TUBB3Q13509 450 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 DHX34Q14147 1143 aaKnown RBP12.82□□□□□ -0.36
HDAC3-213ENST00000492506 SEPT7Q16181 437 aaKnown RBP12.82□□□□□ -0.36
HDAC3-213ENST00000492506 ASTE1Q2TB18 679 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-213ENST00000492506 BOLA3Q53S33 107 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 C1QL3Q5VWW1 255 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 SLC6A19Q695T7 634 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 PPP1R2P3Q6NXS1 205 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 CRTC3Q6UUV7 619 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 CERS6Q6ZMG9 384 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 TRIM48Q8IWZ4 208 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 ST13P4Q8IZP2 240 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-213ENST00000492506 RASGEF1CQ8N431 466 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 LPCAT1Q8NF37 534 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 FDCSPQ8NFU4 85 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 HSPH1Q92598 858 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 C19orf60Q96EN9 201 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 NUDT9Q9BW91 350 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 MFRPQ9BY79 579 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 PCDH9Q9HC56 1237 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 PDE7BQ9NP56 450 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 PKD2L2Q9NZM6 624 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 RARRES3Q9UL19 164 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 FARSAQ9Y285 508 aaKnown RBP12.82□□□□□ -0.36
HDAC3-213ENST00000492506 STK38LQ9Y2H1 464 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF451Q9Y4E5 1061 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 C2CD3Q4AC94 2353 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 AKAP9Q99996 3911 aa12.82□□□□□ -0.36
HDAC3-213ENST00000492506 ESYT3A0FGR9 886 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 CCDC162PA2VCL2 907 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 ANKRD66B4E2M5 251 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 GPR89AB7ZAQ6 455 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 MTA2O94776 668 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 SLC25A14O95258 325 aaPredicted RBP12.81□□□□□ -0.36
HDAC3-213ENST00000492506 MMP2P08253 660 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 EBLN1P0CF75 366 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 GPR89BP0CG08 455 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF7P17097 686 aaPredicted RBP12.81□□□□□ -0.36
HDAC3-213ENST00000492506 CES1P23141 567 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 RPL10P27635 214 aaKnown RBP12.81□□□□□ -0.36
HDAC3-213ENST00000492506 RPS15P62841 145 aaKnown RBP12.81□□□□□ -0.36
HDAC3-213ENST00000492506 GALNT2Q10471 571 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 PLA2G4EQ3MJ16 856 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 TDRD12Q587J7 1177 aaKnown RBP12.81□□□□□ -0.36
HDAC3-213ENST00000492506 TNFAIP8L3Q5GJ75 292 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 AGAP9Q5VTM2 703 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 IZUMO3Q5VZ72 239 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 WASH2PQ6VEQ5 465 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 PPP1R21Q6ZMI0 780 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 C11orf96Q7Z7L8 435 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 BPHLQ86WA6 291 aaPredicted RBP12.81□□□□□ -0.36
HDAC3-213ENST00000492506 LRRC49Q8IUZ0 686 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 SIDT2Q8NBJ9 832 aaKnown RBP12.81□□□□□ -0.36
HDAC3-213ENST00000492506 SLC38A9Q8NBW4 561 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 GPR26Q8NDV2 337 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 PNPLA2Q96AD5 504 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 TIMM29Q9BSF4 260 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 SPATA16Q9BXB7 569 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 SLC29A3Q9BZD2 475 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 SLAMF7Q9NQ25 335 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 WASH6PQ9NQA3 447 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms