RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ASZ1Q8WWH4 475 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 RUFY1Q96T51 708 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 HEMK1Q9Y5R4 338 aaPredicted RBP30.36■■■□□ 2.45
LDB1-204ENST00000490751 TMEM150CB9EJG8 249 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 SLC28A2O43868 658 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 GPC4O75487 556 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 APOA4P06727 396 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 CHRM5P08912 532 aaPredicted RBP30.35■■■□□ 2.45
LDB1-204ENST00000490751 UGT2B7P16662 529 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 ARNTP27540 789 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 NFKB2Q00653 900 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 GPS2Q13227 327 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 HOOK3Q86VS8 718 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 REXO1L1PQ8IX06 675 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 SLC38A9Q8NBW4 561 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 OR1L3Q8NH93 324 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 APOBEC4Q8WW27 367 aaKnown RBP30.35■■■□□ 2.45
LDB1-204ENST00000490751 P2RY12Q9H244 342 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 SPHK1Q9NYA1 384 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 OR6C2Q9NZP2 312 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 GNPTGQ9UJJ9 305 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 TUBD1Q9UJT1 453 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 SOX13Q9UN79 622 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 SPTBP11277 2137 aa30.35■■■□□ 2.45
LDB1-204ENST00000490751 BSNQ9UPA5 3926 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 J3QKU1 62 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 KDM1AO60341 852 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 NDUFS3O75489 264 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 CREG1O75629 220 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 VAPBO95292 243 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 FURINP09958 794 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 MSL3P1P0C860 447 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 AOAHP28039 575 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 MAGEA6P43360 314 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 SARNPP82979 210 aaKnown RBP30.34■■■□□ 2.45
LDB1-204ENST00000490751 TMED2Q15363 201 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 PRICKLE2Q7Z3G6 844 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 SLC35F6Q8N357 371 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 MR1Q95460 341 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 OR2A14Q96R47 310 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 ACTL8Q9H568 366 aa30.34■■■□□ 2.45
LDB1-204ENST00000490751 TLN1Q9Y490 2541 aaKnown RBP30.33■■■□□ 2.45
LDB1-204ENST00000490751 ZNF789Q5FWF6 425 aa30.33■■■□□ 2.45
LDB1-204ENST00000490751 ANKRD22Q5VYY1 191 aa30.33■■■□□ 2.45
LDB1-204ENST00000490751 CDHR3Q6ZTQ4 885 aa30.33■■■□□ 2.45
LDB1-204ENST00000490751 C19orf47Q8N9M1 422 aaKnown RBP30.33■■■□□ 2.45
LDB1-204ENST00000490751 CFAP61Q8NHU2 1237 aa30.33■■■□□ 2.45
LDB1-204ENST00000490751 CPT1BQ92523 772 aa30.33■■■□□ 2.45
LDB1-204ENST00000490751 PANX3Q96QZ0 392 aa30.33■■■□□ 2.45
LDB1-204ENST00000490751 NAP1L3Q99457 506 aaPredicted RBP30.33■■■□□ 2.45
LDB1-204ENST00000490751 TWSG1Q9GZX9 223 aa30.33■■■□□ 2.45
LDB1-204ENST00000490751 CDC14CA4D256 554 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 GOLGA8KD6RF30 607 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 GOLGA8TH3BQL2 631 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 PGRMC1O00264 195 aaKnown RBP30.32■■■□□ 2.44
LDB1-204ENST00000490751 AVILO75366 819 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 RPS3P23396 243 aaKnown RBP eCLIP30.32■■■□□ 2.446e-6■□□□□ 8.7
LDB1-204ENST00000490751 COILP38432 576 aaPredicted RBP30.32■■■□□ 2.44
LDB1-204ENST00000490751 CYP1B1Q16678 543 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 LRRC6Q86X45 466 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 FLVCR1-AS1Q8TAF5 88 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 LRFN5Q96NI6 719 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 GPR87Q9BY21 358 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 POLHQ9Y253 713 aa30.32■■■□□ 2.44
LDB1-204ENST00000490751 SNRNP200O75643 2136 aaKnown RBP30.32■■■□□ 2.44
LDB1-204ENST00000490751 TMEM63AO94886 807 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 SLCO2B1O94956 709 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 RPN2P04844 631 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 KLK3P07288 261 aaPredicted RBP30.31■■■□□ 2.44
LDB1-204ENST00000490751 CYP2A7P20853 494 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 EIF3BP55884 814 aaKnown RBP30.31■■■□□ 2.44
LDB1-204ENST00000490751 RPS18P62269 152 aaKnown RBP30.31■■■□□ 2.44
LDB1-204ENST00000490751 MRNIPQ6NTE8 343 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 CCDC137Q6PK04 289 aaKnown RBP30.31■■■□□ 2.44
LDB1-204ENST00000490751 UNC5DQ6UXZ4 953 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 ZNF517Q6ZMY9 492 aaPredicted RBP30.31■■■□□ 2.44
LDB1-204ENST00000490751 COG1Q8WTW3 980 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 CLIP3Q96DZ5 547 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 FAM60AQ9NP50 221 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 SERTAD3Q9UJW9 196 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 KCNMB2Q9Y691 235 aa30.31■■■□□ 2.44
LDB1-204ENST00000490751 A0A0J9YY10 115 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 ISM1B1AKI9 464 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 MEN1O00255 615 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 ZSCAN12O43309 604 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 RECKO95980 971 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 PTPN4P29074 926 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 PEBP1P30086 187 aaKnown RBP30.3■■■□□ 2.44
LDB1-204ENST00000490751 PKLRP30613 574 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 RAB28P51157 221 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 RPS15P62841 145 aaKnown RBP30.3■■■□□ 2.44
LDB1-204ENST00000490751 PLEKHS1Q5SXH7 462 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 KIAA0930Q6ICG6 404 aaPredicted RBP30.3■■■□□ 2.44
LDB1-204ENST00000490751 CASC4Q6P4E1 433 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 SDCCAG8Q86SQ7 713 aaPredicted RBP30.3■■■□□ 2.44
LDB1-204ENST00000490751 TMEM135Q86UB9 458 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 CAND1Q86VP6 1230 aaKnown RBP30.3■■■□□ 2.44
LDB1-204ENST00000490751 DCUN1D3Q8IWE4 304 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 DSELQ8IZU8 1212 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 OSBPL9Q96SU4 736 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms