RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 UGT2B7P16662 529 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 CD151P48509 253 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 BOP1Q14137 746 aaKnown RBP13.46□□□□□ -0.25
VARS-227ENST00000489979 TAF1AQ15573 450 aaPredicted RBP13.46□□□□□ -0.25
VARS-227ENST00000489979 AGAP7PQ5VUJ5 663 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 PRAMEF13Q5VWM6 474 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 TLDC1Q6P9B6 456 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 IGFL2Q6UWQ7 119 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 ZC3H18Q86VM9 953 aaKnown RBP13.46□□□□□ -0.25
VARS-227ENST00000489979 NXPE1Q8N323 547 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 SLC35G2Q8TBE7 412 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 COG1Q8WTW3 980 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 TFGQ92734 400 aaPredicted RBP13.46□□□□□ -0.25
VARS-227ENST00000489979 ULK4Q96C45 1275 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 AGAP4Q96P64 663 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 FICDQ9BVA6 458 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 SLC22A11Q9NSA0 550 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 IRAK4Q9NWZ3 460 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 COPG2Q9UBF2 871 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 RSPH14Q9UHP6 348 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 ICKQ9UPZ9 632 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 ADGRG4Q8IZF6 3080 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 PKDREJQ9NTG1 2253 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 A0A1B0GUH1 482 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 AGAP14A8MT82 685 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 CFAP99D6REC4 459 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 CST8O60676 142 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 MMP11P24347 488 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 ARHGAP25P42331 645 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 CDKN2BP42772 138 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 TMPRSS15P98073 1019 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 TFDP2Q14188 446 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 SLC18A3Q16572 532 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 ZNF658BQ4V348 819 aaPredicted RBP13.45□□□□□ -0.26
VARS-227ENST00000489979 LRRC38Q5VT99 294 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 IRAK1BP1Q5VVH5 260 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 KAZNQ674X7 775 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 B3GNTL1Q67FW5 361 aaPredicted RBP13.45□□□□□ -0.26
VARS-227ENST00000489979 UNC5AQ6ZN44 842 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 OR13C4Q8NGS5 318 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 OR2A14Q96R47 310 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 VAT1Q99536 393 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 COPS8Q99627 209 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 CHRNA10Q9GZZ6 450 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 DDX56Q9NY93 547 aaKnown RBP13.45□□□□□ -0.26
VARS-227ENST00000489979 SPHK1Q9NYA1 384 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 CDC23Q9UJX2 597 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 HYOU1Q9Y4L1 999 aa13.45□□□□□ -0.26
VARS-227ENST00000489979 CELSR1Q9NYQ6 3014 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 A0A0J9YY10 115 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 CCDC78A2IDD5 438 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 C5orf60A6NFR6 353 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 SOCS6O14544 535 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 GYPCP04921 128 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 ITGALP20701 1170 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 ALAS2P22557 587 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 UBASH3AP57075 661 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 FANCCQ00597 558 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 RPA4Q13156 261 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 OLIG2Q13516 323 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 IQCB1Q15051 598 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 ZXDCQ2QGD7 858 aaPredicted RBP13.44□□□□□ -0.26
VARS-227ENST00000489979 ZNF449Q6P9G9 518 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 FAM180AQ6UWF9 173 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 SNX20Q7Z614 316 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 PARP9Q8IXQ6 854 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 DNAJC22Q8N4W6 341 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 FLVCR1-AS1Q8TAF5 88 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 HEXDCQ8WVB3 486 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 NACC2Q96BF6 587 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 IQCDQ96DY2 449 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 SLX1AQ9BQ83 275 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 APOL2Q9BQE5 337 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 NDC1Q9BTX1 674 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 EPS8L2Q9H6S3 715 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 VPS37BQ9H9H4 285 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 PLCL2Q9UPR0 1127 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 ZFHX3Q15911 3703 aa13.44□□□□□ -0.26
VARS-227ENST00000489979 CCL22O00626 93 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 JRKO75564 520 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 CHRM5P08912 532 aaPredicted RBP13.43□□□□□ -0.26
VARS-227ENST00000489979 ITGAXP20702 1163 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 SHMT2P34897 504 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 CDKN1CP49918 316 aaPredicted RBP13.43□□□□□ -0.26
VARS-227ENST00000489979 GEMP55040 296 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
VARS-227ENST00000489979 TLR1Q15399 786 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 TAZQ16635 292 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 ASTE1Q2TB18 679 aaPredicted RBP13.43□□□□□ -0.26
VARS-227ENST00000489979 MICALCLQ6ZW33 695 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 OR5AR1Q8NGP9 310 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 P3H4Q92791 437 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 HAUS1Q96CS2 278 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 GORASP1Q9BQQ3 440 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 LHPPQ9H008 270 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 OLAHQ9NV23 265 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 ZDHHC3Q9NYG2 299 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 TRHDEQ9UKU6 1024 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms