RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 AP1M2Q9Y6Q5 423 aa16.39■□□□□ 0.21
TOP3B-217ENST00000489581 PSTPIP1O43586 416 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 KLHL41O60662 606 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 IPO13O94829 963 aaKnown RBP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ZRANB2O95218 330 aaKnown RBP eCLIP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 IGHEP01854 428 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 UGT2B7P16662 529 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 PSMB4P28070 264 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 GABRA4P48169 554 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ZNF140P52738 457 aaPredicted RBP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 MSLNQ13421 630 aaPredicted RBP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 BOP1Q14137 746 aaKnown RBP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 CYP2A13Q16696 494 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ZNF449Q6P9G9 518 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 PPP1R32Q7Z5V6 425 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ZNF655Q8N720 491 aaPredicted RBP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 HEXDCQ8WVB3 486 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 UBE2Q2Q8WVN8 375 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 TM9SF4Q92544 642 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 PTERQ96BW5 349 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 OR2A14Q96R47 310 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 BARD1Q99728 777 aaKnown RBP16.38■□□□□ 0.21
TOP3B-217ENST00000489581 HEMGNQ9BXL5 484 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ATP13A2Q9NQ11 1180 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 IRAK4Q9NWZ3 460 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ZDHHC3Q9NYG2 299 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 PCDHGA10Q9Y5H3 936 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 CSAG2Q9Y5P2 127 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ALG6Q9Y672 507 aa16.38■□□□□ 0.21
TOP3B-217ENST00000489581 ZSCAN9O15535 394 aaPredicted RBP16.37■□□□□ 0.21
TOP3B-217ENST00000489581 UMODP07911 640 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 PRSS56P0CW18 603 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 TNFRSF8P28908 595 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 MC4RP32245 332 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 ITPRIPL1Q6GPH6 555 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 MRPL14Q6P1L8 145 aaKnown RBP16.37■□□□□ 0.21
TOP3B-217ENST00000489581 UNC5AQ6ZN44 842 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 RCOR2Q8IZ40 523 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 CLDN19Q8N6F1 224 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 OR5AR1Q8NGP9 310 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 PROKR1Q8TCW9 393 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 AP1M1Q9BXS5 423 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 VPS37BQ9H9H4 285 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 AGPAT4Q9NRZ5 378 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 ABHD10Q9NUJ1 306 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 TXLNGQ9NUQ3 528 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 SPHK1Q9NYA1 384 aa16.37■□□□□ 0.21
TOP3B-217ENST00000489581 IGLV3-16A0A075B6K0 115 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 ALOX12BO75342 701 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 TPM3P06753 285 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 CD63P08962 238 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 ITGA3P26006 1051 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 ACRV1P26436 265 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 SOX8P57073 446 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 RPA4Q13156 261 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 TRIM14Q14142 442 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 SPARCL1Q14515 664 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 BRD3Q15059 726 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 TCEAL1Q15170 157 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 HIF1AQ16665 826 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 GPR33Q49SQ1 333 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 NKAIN1Q4KMZ8 207 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 BBS12Q6ZW61 710 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 TAS2R42Q7RTR8 314 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 SERPINA9Q86WD7 417 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 KATNAL2Q8IYT4 538 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 ST6GALNAC3Q8NDV1 305 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 DNAJC1Q96KC8 554 aaKnown RBP16.36■□□□□ 0.21
TOP3B-217ENST00000489581 AAR2Q9Y312 384 aaKnown RBP16.36■□□□□ 0.21
TOP3B-217ENST00000489581 CSMD1Q96PZ7 3565 aa16.36■□□□□ 0.21
TOP3B-217ENST00000489581 TRBV5-4A0A0C4DH59 114 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 A0A0J9YY10 115 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 APOC4-APOC2K7ER74 178 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 AGPSO00116 658 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 APOC2P02655 101 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 CHRM5P08912 532 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-217ENST00000489581 SHMT2P34897 504 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 AIMP2Q13155 320 aaKnown RBP16.35■□□□□ 0.21
TOP3B-217ENST00000489581 PRPSAP1Q14558 356 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 ANKRD20A2Q5SQ80 823 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 CCDC181Q5TID7 509 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 ANKRD20A1Q5TYW2 823 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 ANKRD20A3Q5VUR7 823 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 DENND5AQ6IQ26 1287 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 TLDC1Q6P9B6 456 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 KCNMB4Q86W47 210 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 FLVCR1-AS1Q8TAF5 88 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 WDR77Q9BQA1 342 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-217ENST00000489581 INTUQ9ULD6 942 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 SRPK3Q9UPE1 567 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 ASF1AQ9Y294 204 aa16.35■□□□□ 0.21
TOP3B-217ENST00000489581 TDRKHQ9Y2W6 561 aaKnown RBP16.35■□□□□ 0.21
TOP3B-217ENST00000489581 LRRTM2O43300 516 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 TPBGLP0DKB5 382 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 ALAS2P22557 587 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 NAPRTQ6XQN6 538 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 FAM20CQ8IXL6 584 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 DNAJC22Q8N4W6 341 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms