RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 RPL26P61254 145 aaKnown RBP14.4□□□□□ -0.1
UFD1-209ENST00000489406 PTP4A2Q12974 167 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 GSE1Q14687 1217 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 ABHD17BQ5VST6 288 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 SHEQ5VZ18 495 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 ATG9BQ674R7 924 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 TMEM211Q6ICI0 200 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 TRIM73Q86UV7 250 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 HOOK3Q86VS8 718 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 SIAH3Q8IW03 269 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 ATPAF2Q8N5M1 289 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 RND1Q92730 232 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 CNPY3Q9BT09 278 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 CLSTN2Q9H4D0 955 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 FAM8A1Q9UBU6 413 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 NXT1Q9UKK6 140 aaKnown RBP14.4□□□□□ -0.1
UFD1-209ENST00000489406 RPL26L1Q9UNX3 145 aaKnown RBP14.4□□□□□ -0.1
UFD1-209ENST00000489406 SHOC2Q9UQ13 582 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 CTNND2Q9UQB3 1225 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 HRH3Q9Y5N1 445 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 CPAMD8Q8IZJ3 1885 aa14.4□□□□□ -0.1
UFD1-209ENST00000489406 CUBNO60494 3623 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 SIGLEC16A6NMB1 481 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 IDSB3KWA1 339 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 ANKRD66B4E2M5 251 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 SMC2O95347 1197 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 MT-CYBP00156 380 aaPredicted RBP14.39□□□□□ -0.11
UFD1-209ENST00000489406 NDUFS1P28331 727 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 CDH6P55285 790 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 RPL7AP62424 266 aaKnown RBP14.39□□□□□ -0.11
UFD1-209ENST00000489406 TXNRD3NBQ6F5E7 133 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 TMEM220Q6QAJ8 160 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 NEK10Q6ZWH5 1172 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 NDUFAF7Q7L592 441 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 PRSS58Q8IYP2 241 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 AMER2Q8N7J2 671 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 RASGEF1AQ8N9B8 481 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 ACVR1CQ8NER5 493 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 SMARCE1Q969G3 411 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 MCEEQ96PE7 176 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 SNRNP25Q9BV90 132 aaKnown RBP14.39□□□□□ -0.11
UFD1-209ENST00000489406 HES7Q9BYE0 225 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 ETNK2Q9NVF9 386 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 CWC15Q9P013 229 aaKnown RBP14.39□□□□□ -0.11
UFD1-209ENST00000489406 TTLL3Q9Y4R7 772 aa14.39□□□□□ -0.11
UFD1-209ENST00000489406 SONP18583 2426 aaKnown RBP14.39□□□□□ -0.11
UFD1-209ENST00000489406 A0A1B0GX78 115 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 BICDL2A1A5D9 508 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 GTPBP10A4D1E9 387 aaKnown RBP14.38□□□□□ -0.11
UFD1-209ENST00000489406 ANKRD62A6NC57 917 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 OR2AG2A6NM03 316 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 C2orf74A8MZ97 194 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
UFD1-209ENST00000489406 ONECUT2O95948 504 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 SLC35G4P0C7Q5 338 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 PIRTP0C851 137 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 ITGAMP11215 1152 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 COX6A1P12074 109 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 CA4P22748 312 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 CARSP49589 748 aaKnown RBP14.38□□□□□ -0.11
UFD1-209ENST00000489406 ZNF33BQ06732 778 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 DPYSQ14117 519 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 SYCP1Q15431 976 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 ATP13A5Q4VNC0 1218 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 CNSTQ6PJW8 725 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 ARSKQ6UWY0 536 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 CD163Q86VB7 1156 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 TEX26Q8N6G2 289 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 BEND7Q8N7W2 519 aaPredicted RBP14.38□□□□□ -0.11
UFD1-209ENST00000489406 MYRIPQ8NFW9 859 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 FRMD6Q96NE9 622 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 VPS35Q96QK1 796 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
UFD1-209ENST00000489406 TUBGCP2Q9BSJ2 902 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 ACTR10Q9NZ32 417 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 ADAM22Q9P0K1 906 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 NFKBIL1Q9UBC1 381 aaPredicted RBP14.38□□□□□ -0.11
UFD1-209ENST00000489406 PCSK1NQ9UHG2 260 aa14.38□□□□□ -0.11
UFD1-209ENST00000489406 ASPDHA6ND91 283 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 VSTM2BA6NLU5 285 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 EEF1DP29692 281 aaKnown RBP14.37□□□□□ -0.11
UFD1-209ENST00000489406 KIR2DL3P43628 341 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 OR1D4P47884 311 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 RAB28P51157 221 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 EEF1A2Q05639 463 aaKnown RBP14.37□□□□□ -0.11
UFD1-209ENST00000489406 KLC1Q07866 573 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 SPESP1Q6UW49 350 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 RPRMLQ8N4K4 120 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 METTL27Q8N6F8 245 aaPredicted RBP14.37□□□□□ -0.11
UFD1-209ENST00000489406 FAM57AQ8TBR7 257 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 BRSK1Q8TDC3 778 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 DLG3Q92796 817 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.37□□□□□ -0.11
UFD1-209ENST00000489406 SEC16BQ96JE7 1060 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 PEBP4Q96S96 227 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 DMRT3Q9NQL9 472 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 RAD18Q9NS91 495 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms