RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TSSK1BQ9BXA7 367 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 ASH1LQ9NR48 2969 aaKnown RBP22.26■■□□□ 1.15
COL9A3-213ENST00000489045 TREX1Q9NSU2 369 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 SPHK1Q9NYA1 384 aa22.26■■□□□ 1.15
COL9A3-213ENST00000489045 FLNBO75369 2602 aaKnown RBP22.26■■□□□ 1.15
COL9A3-213ENST00000489045 UBR5O95071 2799 aaPredicted RBP22.25■■□□□ 1.15
COL9A3-213ENST00000489045 IQCF5A8MTL0 148 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 CD3EAPO15446 510 aaKnown RBP22.25■■□□□ 1.15
COL9A3-213ENST00000489045 WISP1O95388 367 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 KLK3P07288 261 aaPredicted RBP22.25■■□□□ 1.15
COL9A3-213ENST00000489045 CHRM5P08912 532 aaPredicted RBP22.25■■□□□ 1.15
COL9A3-213ENST00000489045 CYP2A7P20853 494 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 HSPA14Q0VDF9 509 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 PLEKHS1Q5SXH7 462 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 CDHR3Q6ZTQ4 885 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 VRK3Q8IV63 474 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 SLC22A15Q8IZD6 547 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 DSELQ8IZU8 1212 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 C19orf47Q8N9M1 422 aaKnown RBP22.25■■□□□ 1.15
COL9A3-213ENST00000489045 OR2A14Q96R47 310 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 CARD6Q9BX69 1037 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 AP1M1Q9BXS5 423 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 IL22Q9GZX6 179 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 CHST8Q9H2A9 424 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 ACTR5Q9H9F9 607 aaPredicted RBP22.25■■□□□ 1.15
COL9A3-213ENST00000489045 BFARQ9NZS9 450 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 CDYLQ9Y232 598 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 MAN2B2Q9Y2E5 1009 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 FER1L5A0AVI2 2057 aa22.25■■□□□ 1.15
COL9A3-213ENST00000489045 AP3B1O00203 1094 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 MEN1O00255 615 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 PRMT5O14744 637 aaPredicted RBP22.24■■□□□ 1.15
COL9A3-213ENST00000489045 MGAT1P26572 445 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 NMBRP28336 390 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 RORAP35398 523 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 NPY2RP49146 381 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 TTPAP49638 278 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 ITGA1P56199 1179 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 DNAJC21Q5F1R6 531 aaKnown RBP22.24■■□□□ 1.15
COL9A3-213ENST00000489045 LCN10Q6JVE6 187 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 SYVN1Q86TM6 617 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 KRT222Q8N1A0 295 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 PRELID2Q8N945 189 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 FLVCR1-AS1Q8TAF5 88 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 ASZ1Q8WWH4 475 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 SEC14L1Q92503 715 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 HOMER3Q9NSC5 361 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 OR6C2Q9NZP2 312 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 SERTAD3Q9UJW9 196 aa22.24■■□□□ 1.15
COL9A3-213ENST00000489045 TTC7AQ9ULT0 858 aaPredicted RBP22.24■■□□□ 1.15
COL9A3-213ENST00000489045 FARSAQ9Y285 508 aaKnown RBP22.24■■□□□ 1.15
COL9A3-213ENST00000489045 NRDCO43847 1150 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 KDM1AO60341 852 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 GPC4O75487 556 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 TPSB2P20231 275 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 TERF1P54274 439 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 PMS2P54278 862 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 IL10RAQ13651 578 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 TRIP13Q15645 432 aaPredicted RBP22.23■■□□□ 1.15
COL9A3-213ENST00000489045 TPSAB1Q15661 275 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 UGT8Q16880 541 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 LACTB2Q53H82 288 aaPredicted RBP22.23■■□□□ 1.15
COL9A3-213ENST00000489045 IZUMO3Q5VZ72 239 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 CLMPQ9H6B4 373 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 FAM60AQ9NP50 221 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 PCMTD2Q9NV79 361 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 SYBUQ9NX95 663 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 TP53TG5Q9Y2B4 290 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 SEC16AO15027 2179 aa22.23■■□□□ 1.15
COL9A3-213ENST00000489045 A0A0J9YY10 115 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 TCRBV7S3A2A0A539 114 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 E7EQ34 232 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 RFPL1O75677 317 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 APOA4P06727 396 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 NR1D1P20393 614 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 AOAHP28039 575 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 PEBP1P30086 187 aaKnown RBP22.22■■□□□ 1.15
COL9A3-213ENST00000489045 PKLRP30613 574 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 KCNC4Q03721 635 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 TMED2Q15363 201 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 ZIC1Q15915 447 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 DEFB110Q30KQ9 67 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 PTRHD1Q6GMV3 140 aaKnown RBP22.22■■□□□ 1.15
COL9A3-213ENST00000489045 LRRC8BQ6P9F7 803 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 SYTL1Q8IYJ3 562 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 ENDOVQ8N8Q3 282 aaKnown RBP22.22■■□□□ 1.15
COL9A3-213ENST00000489045 CFAP61Q8NHU2 1237 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 TCTN2Q96GX1 697 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 SLC7A5P2Q9GIP4 190 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 P2RY12Q9H244 342 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 GNPTGQ9UJJ9 305 aa22.22■■□□□ 1.15
COL9A3-213ENST00000489045 TNRC6AQ8NDV7 1962 aaKnown RBP22.21■■□□□ 1.15
COL9A3-213ENST00000489045 ISM1B1AKI9 464 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 MKRN2OSH3BPM6 223 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 VPS41P49754 854 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 CSRP3P50461 194 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 CDK16Q00536 496 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 TLE1Q04724 770 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 PTCHD3Q3KNS1 767 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 CES3Q6UWW8 571 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms