RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GPR75-ASB3A0A0A6YYF3 556 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 A0A1W2PN81 502 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 hCG_1807616A0A1W2PRN6 198 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 ANKUB1A6NFN9 424 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 SH2B2O14492 632 aaPredicted RBP3.22□□□□□ -1.89
RFC4-213ENST00000489028 ARHGEF9O43307 516 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 AVILO75366 819 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 HSP90AA1P07900 732 aaKnown RBP3.22□□□□□ -1.89
RFC4-213ENST00000489028 CEBPBP17676 345 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 CHRNA7P36544 502 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 SNRPD1P62314 119 aaKnown RBP3.22□□□□□ -1.89
RFC4-213ENST00000489028 CDR2Q01850 454 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 RRS1Q15050 365 aaKnown RBP3.22□□□□□ -1.89
RFC4-213ENST00000489028 SPDYCQ5MJ68 293 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 ITPRIPL1Q6GPH6 555 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 DHRS7BQ6IAN0 325 aaPredicted RBP3.22□□□□□ -1.89
RFC4-213ENST00000489028 TMEM211Q6ICI0 200 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 AFAP1Q8N556 730 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 TMEM178AQ8NBL3 297 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 IRGQQ8WZA9 623 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 SLC22A18Q96BI1 424 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 NSL1Q96IY1 281 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 TIGD1Q96MW7 591 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 CDK19Q9BWU1 502 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 RNF186Q9NXI6 227 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 B3GAT1Q9P2W7 334 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 ASIC3Q9UHC3 531 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 ZDHHC2Q9UIJ5 367 aa3.22□□□□□ -1.89
RFC4-213ENST00000489028 TMEM221A6NGB7 291 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 MSGN1A6NI15 193 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 PRAMEF11O60813 436 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 PRKRAO75569 313 aaKnown RBP3.21□□□□□ -1.9
RFC4-213ENST00000489028 PORP16435 677 aaPredicted RBP3.21□□□□□ -1.9
RFC4-213ENST00000489028 SLC6A12P48065 614 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 SNX16P57768 344 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 PRKCZQ05513 592 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 CHAF1BQ13112 559 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 NR1D2Q14995 579 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 XKR3Q5GH77 459 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 COMMD2Q86X83 199 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 TMEM139Q8IV31 216 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 RPAP2Q8IXW5 612 aaPredicted RBP3.21□□□□□ -1.9
RFC4-213ENST00000489028 ZNF595Q8IYB9 648 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 CFAP206Q8IYR0 622 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 DCLK2Q8N568 766 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 ZNF689Q96CS4 500 aaPredicted RBP3.21□□□□□ -1.9
RFC4-213ENST00000489028 LINC00479Q96M42 142 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 ATOH8Q96SQ7 321 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 OSGEPL1Q9H4B0 414 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 ATP13A3Q9H7F0 1226 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 PSD3Q9NYI0 1048 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 LRWD1Q9UFC0 647 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 PCDHGB4Q9UN71 923 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 GPR34Q9UPC5 381 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 RNF215Q9Y6U7 377 aa3.21□□□□□ -1.9
RFC4-213ENST00000489028 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 ERI2A8K979 691 aaKnown RBP3.2□□□□□ -1.9
RFC4-213ENST00000489028 SLCO1B7G3V0H7 640 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 KHDRBS3O75525 346 aaKnown RBP3.2□□□□□ -1.9
RFC4-213ENST00000489028 PGM3O95394 542 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 DNASE1P24855 282 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 MAGEA11P43364 429 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 PDX1P52945 283 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 CDH13P55290 713 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 HNRNPKP61978 463 aaKnown RBP eCLIP3.2□□□□□ -1.9
RFC4-213ENST00000489028 EPS8Q12929 822 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 HNRNPDQ14103 355 aaKnown RBP3.2□□□□□ -1.9
RFC4-213ENST00000489028 WTAPQ15007 396 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 ITPRIPL2Q3MIP1 535 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 HYIQ5T013 277 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 RNASEH2BQ5TBB1 312 aaKnown RBP3.2□□□□□ -1.9
RFC4-213ENST00000489028 PSRC1Q6PGN9 363 aaPredicted RBP3.2□□□□□ -1.9
RFC4-213ENST00000489028 TICAM2Q86XR7 235 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 GUF1Q8N442 669 aaKnown RBP3.2□□□□□ -1.9
RFC4-213ENST00000489028 NPEPL1Q8NDH3 523 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 OR11H4Q8NGC9 324 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 MRGPRDQ8TDS7 321 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 LPGAT1Q92604 370 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 CALML4Q96GE6 196 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 MMP27Q9H306 513 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 Q9N2K0 584 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 ZDHHC18Q9NUE0 388 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 DAPK2Q9UIK4 370 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 EXOGQ9Y2C4 368 aaKnown RBP3.2□□□□□ -1.9
RFC4-213ENST00000489028 GRIP1Q9Y3R0 1128 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 MMP24Q9Y5R2 645 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 PRSS21Q9Y6M0 314 aa3.2□□□□□ -1.9
RFC4-213ENST00000489028 PCDH11YQ9BZA8 1340 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 RNASEH1O60930 286 aaKnown RBP3.19□□□□□ -1.9
RFC4-213ENST00000489028 MOCS3O95396 460 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 CENPBP07199 599 aaPredicted RBP3.19□□□□□ -1.9
RFC4-213ENST00000489028 OR2T7P0C7T2 308 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 IGHV4-31P0DP07 118 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 KRT5P13647 590 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 DPEP1P16444 411 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 ALOX12P18054 663 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 BDNFP23560 247 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 PTPN3P26045 913 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 SLC6A6P31641 620 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 STAT2P52630 851 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms