RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 IL10RBQ08334 325 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 PPIDQ08752 370 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 GPS2Q13227 327 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ZNF177Q13360 481 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 EIF4EBP2Q13542 120 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 CDH18Q13634 790 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CAMK1Q14012 370 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CCNIQ14094 377 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 PDE1CQ14123 709 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 SIM2Q14190 667 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 CSHL1Q14406 222 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 PRPSAP1Q14558 356 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ZNF235Q14590 738 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 SLMAPQ14BN4 828 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CLCA4Q14CN2 919 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 MORF4L2Q15014 288 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TEAD2Q15562 447 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TRIP13Q15645 432 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 TPSAB1Q15661 275 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 P3H1Q32P28 736 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 PARP15Q460N3 678 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 SPDYE7PQ495Y7 208 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 MPPE1Q53F39 396 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 FAM133BQ5BKY9 247 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 TCEAL5Q5H9L2 206 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 MS4A13Q5J8X5 152 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 RARS2Q5T160 578 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 CERCAMQ5T4B2 595 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CFAP58Q5T655 872 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 FAM72AQ5TYM5 149 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ICE2Q659A1 982 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 DUPD1Q68J44 220 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TXNDC8Q6A555 127 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 NADSYN1Q6IA69 706 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 FAM72DQ6L9T8 149 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 LIN54Q6MZP7 749 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CES5AQ6NT32 575 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ARMC6Q6NXE6 501 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 FBXL22Q6P050 247 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TMEM108Q6UXF1 575 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 HTR3DQ70Z44 454 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 GET4Q7L5D6 327 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 ANKS1BQ7Z6G8 1248 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 GRASPQ7Z6J2 395 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 MTERF4Q7Z6M4 381 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 TFAP2DQ7Z6R9 452 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TMEM150AQ86TG1 271 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 RBM23Q86U06 439 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 HOOK3Q86VS8 718 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 FAM72BQ86X60 149 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 LDLRAD3Q86YD5 345 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 LRRC49Q8IUZ0 686 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 UMODL1-AS1Q8N2C9 162 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CPXM2Q8N436 756 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 MREGQ8N565 214 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ZCCHC9Q8N567 271 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 ESX1Q8N693 406 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 NPWQ8N729 165 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ARL14EPQ8N8R7 260 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 MAB21L3Q8N8X9 362 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 FAM71DQ8N9W8 422 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TDRD5Q8NAT2 981 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 VN1R2Q8NFZ6 395 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 MBD3L2Q8NHZ7 208 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 IL17DQ8TAD2 202 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 AENQ8WTP8 325 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 DEPDC1BQ8WUY9 529 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 HTR3CQ8WXA8 447 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ING5Q8WYH8 240 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CPT1BQ92523 772 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 HDAC2Q92769 488 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 CAVIN3Q969G5 261 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 EXOC4Q96A65 974 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ZNF707Q96C28 371 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 RTP4Q96DX8 246 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 HMCESQ96FZ2 354 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 P2RY11Q96G91 374 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 CELF6Q96J87 481 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 MAELQ96JY0 434 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 C1orf74Q96LT6 269 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 SPATA13Q96N96 652 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TTC25Q96NG3 672 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TRAPPC9Q96Q05 1148 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 OR14A2Q96R54 314 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 SLC22A12Q96S37 553 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 VAT1Q99536 393 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 TMEM121Q9BTD3 319 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 FRMD8Q9BZ67 464 aaPredicted RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 TWSG1Q9GZX9 223 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 RETREG1Q9H6L5 497 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 NOD2Q9HC29 1040 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 XAB2Q9HCS7 855 aaKnown RBP2.35□□□□□ -2.03
LBR-208ENST00000488632 TRIM36Q9NQ86 728 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 GDF3Q9NR23 364 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 GKN1Q9NS71 199 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ZDHHC18Q9NUE0 388 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 ETNK2Q9NVF9 386 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 HCFC1R1Q9NWW0 138 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 MPP6Q9NZW5 540 aa2.35□□□□□ -2.03
LBR-208ENST00000488632 NDUFAF4Q9P032 175 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms