RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 KBTBD3Q8NAB2 608 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 HJURPQ8NCD3 748 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 TM9SF4Q92544 642 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 JAKMIP2Q96AA8 810 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 EVI5LQ96CN4 794 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 FAM120BQ96EK7 910 aaKnown RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 OXNAD1Q96HP4 312 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 CHCHD6Q9BRQ6 235 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 RTN4RQ9BZR6 473 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 PRO3102Q9H379 93 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 HRH4Q9H3N8 390 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 TFB2MQ9H5Q4 396 aaKnown RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 CHMP1AQ9HD42 196 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 ECHDC1Q9NTX5 307 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 HAUS2Q9NVX0 235 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 NSMCE4AQ9NXX6 385 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 HACL1Q9UJ83 578 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 YTHDC2Q9H6S0 1430 aaKnown RBP4.1□□□□□ -1.75
ITGB1-214ENST00000488427 ANKRD50Q9ULJ7 1429 aa4.1□□□□□ -1.75
ITGB1-214ENST00000488427 HTTP42858 3142 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 CTAGE9A4FU28 777 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 PRKNO60260 465 aaPredicted RBP4.09□□□□□ -1.75
ITGB1-214ENST00000488427 CTSVO60911 334 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 ZNF217O75362 1048 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 OR2C1O95371 312 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 LDLRP01130 860 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 TFAP2AP05549 437 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 CTAGE8P0CG41 777 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 MATR3P43243 847 aaKnown RBP eCLIP4.09□□□□□ -1.75
ITGB1-214ENST00000488427 RPS18P62269 152 aaKnown RBP4.09□□□□□ -1.75
ITGB1-214ENST00000488427 MC1RQ01726 317 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 WTAPQ15007 396 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 RILPL1Q5EBL4 403 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 CST9Q5W186 159 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 ADALQ6DHV7 355 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 MZT2BQ6NZ67 158 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 CTAGE4Q8IX94 777 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 TAGAPQ8N103 731 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 MTERF3Q96E29 417 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 ZNF354BQ96LW1 612 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 CEP295NLQ96MC4 621 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 GAD1Q99259 594 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 PCYT2Q99447 389 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 DDOQ99489 341 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 SDF4Q9BRK5 362 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 APOBEC3GQ9HC16 384 aaKnown RBP4.09□□□□□ -1.75
ITGB1-214ENST00000488427 SLC38A7Q9NVC3 462 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 RNF186Q9NXI6 227 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 DNAJB4Q9UDY4 337 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 VPS28Q9UK41 221 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 TMEM5Q9Y2B1 443 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 JRKLQ9Y4A0 524 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 TRANK1O15050 2925 aa4.09□□□□□ -1.75
ITGB1-214ENST00000488427 MAP2P11137 1827 aaKnown RBP4.09□□□□□ -1.76
ITGB1-214ENST00000488427 FASNP49327 2511 aaKnown RBP4.09□□□□□ -1.76
ITGB1-214ENST00000488427 MED19A0JLT2 244 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 A6NCN8 305 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 TMEM189-UBE2V1I3L0A0 370 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 J3QR06 171 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 GRID2O43424 1007 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 GPR137BO60478 399 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 KCNK5O95279 499 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 BAG4O95429 457 aaKnown RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 INSRP06213 1382 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 FGF5P12034 268 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 TPRP12270 2363 aaKnown RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 GJA1P17302 382 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 SLC15A1P46059 708 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 LMAN1P49257 510 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 CD81P60033 236 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 TMF1P82094 1093 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 CPSF1Q10570 1443 aaKnown RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 EPS8Q12929 822 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 UBE2V1Q13404 147 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 RAB41Q5JT25 222 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 STXBP5Q5T5C0 1151 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 KIAA0930Q6ICG6 404 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 CEACAM20Q6UY09 585 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 ZNF534Q76KX8 674 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 MON2Q7Z3U7 1717 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 ZNF329Q86UD4 541 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 ERLEC1Q96DZ1 483 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 MOV10L1Q9BXT6 1211 aaKnown RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 MAF1Q9H063 256 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 TRPC7Q9HCX4 862 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 ARHGEF38Q9NXL2 777 aa4.08□□□□□ -1.76
ITGB1-214ENST00000488427 ZNF215Q9UL58 517 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 KMT2BQ9UMN6 2715 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-214ENST00000488427 TCF20Q9UGU0 1960 aaKnown RBP4.07□□□□□ -1.76
ITGB1-214ENST00000488427 BCORQ6W2J9 1755 aa4.07□□□□□ -1.76
ITGB1-214ENST00000488427 ARFGEF2Q9Y6D5 1785 aa4.07□□□□□ -1.76
ITGB1-214ENST00000488427 FAM208AQ9UK61 1670 aaKnown RBP4.07□□□□□ -1.76
ITGB1-214ENST00000488427 POLR3AO14802 1390 aaPredicted RBP4.07□□□□□ -1.76
ITGB1-214ENST00000488427 PALLDQ8WX93 1383 aa4.07□□□□□ -1.76
ITGB1-214ENST00000488427 BLOC1S5-TXNDC5H3BN57 136 aa4.07□□□□□ -1.76
ITGB1-214ENST00000488427 IPO8O15397 1037 aaKnown RBP4.07□□□□□ -1.76
ITGB1-214ENST00000488427 SOCS5O75159 536 aa4.07□□□□□ -1.76
ITGB1-214ENST00000488427 CELF2O95319 508 aaKnown RBP4.07□□□□□ -1.76
ITGB1-214ENST00000488427 LIPFP07098 398 aa4.07□□□□□ -1.76
ITGB1-214ENST00000488427 KRT19P08727 400 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms