RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMS3-205ENST00000487150 FAM136AQ96C01 138 aa14.22□□□□□ -0.13
LIMS3-205ENST00000487150 TSPAN17Q96FV3 270 aa14.22□□□□□ -0.13
LIMS3-205ENST00000487150 ZPBPQ9BS86 351 aa14.22□□□□□ -0.13
LIMS3-205ENST00000487150 TMEM121BQ9BXQ6 578 aaPredicted RBP14.22□□□□□ -0.13
LIMS3-205ENST00000487150 ASPSCR1Q9BZE9 553 aa14.22□□□□□ -0.13
LIMS3-205ENST00000487150 POPDC3Q9HBV1 291 aa14.22□□□□□ -0.13
LIMS3-205ENST00000487150 LNPEPQ9UIQ6 1025 aa14.22□□□□□ -0.13
LIMS3-205ENST00000487150 POMT2Q9UKY4 750 aa14.22□□□□□ -0.13
LIMS3-205ENST00000487150 PRAMEF33A0A0G2JMD5 474 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 PIPSLA2A3N6 862 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 GSAPA4D1B5 854 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 BRINP1O60477 761 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 TNFSF15O95150 251 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 MATN4O95460 622 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 C8GP07360 202 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 PKLRP30613 574 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 GFERP55789 205 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 IL2P60568 153 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 CFHR1Q03591 330 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 ABRQ12979 859 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 PRKG2Q13237 762 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 KIR2DS3Q14952 304 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 KLHL38Q2WGJ6 581 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 ACSBG2Q5FVE4 666 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 SNAP47Q5SQN1 464 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 HECTD2Q5U5R9 776 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 CACHD1Q5VU97 1274 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 FAM129CQ86XR2 697 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 CTAGE3PQ8IX95 158 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 KDF1Q8NAX2 398 aaPredicted RBP14.21□□□□□ -0.13
LIMS3-205ENST00000487150 FBXO15Q8NCQ5 510 aaPredicted RBP14.21□□□□□ -0.13
LIMS3-205ENST00000487150 ELMO2Q96JJ3 720 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 SLC46A1Q96NT5 459 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 NDNQ99608 321 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 DDA1Q9BW61 102 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 LRRC4CQ9HCJ2 640 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 C1GALT1Q9NS00 363 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 SEMA5BQ9P283 1151 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 PISDQ9UG56 409 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 KLHL3Q9UH77 587 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 VWA7Q9Y334 891 aa14.21□□□□□ -0.13
LIMS3-205ENST00000487150 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 C1QTNF9BB2RNN3 333 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 RASGRF2O14827 1237 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ZBTB14O43829 449 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 PSIP1O75475 530 aaKnown RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 C1orf105O95561 183 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ZBTB11O95625 1053 aaPredicted RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 RHOXF2BP0C7M4 288 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 C1QTNF9P0C862 333 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 CYP2A7P20853 494 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 FDXRP22570 491 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 GABRB3P28472 473 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 SPRP35270 261 aaPredicted RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 PCBP4P57723 403 aaKnown RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 POU4F1Q01851 419 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ACY1Q03154 408 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ARHGAP19Q14CB8 494 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 C16orf72Q14CZ0 275 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 TRADDQ15628 312 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 KYNUQ16719 465 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 TMTC4Q5T4D3 741 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 GRTP1Q5TC63 336 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ANKS6Q68DC2 871 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 FOXR1Q6PIV2 292 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 TAOK1Q7L7X3 1001 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 CCDC91Q7Z6B0 441 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 CLEC14AQ86T13 490 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 BPHLQ86WA6 291 aaPredicted RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 MARCH9Q86YJ5 346 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 RCBTB1Q8NDN9 531 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 GIMAP7Q8NHV1 300 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 SNIP1Q8TAD8 396 aaKnown RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 KLHL6Q8WZ60 621 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 CYTH2Q99418 400 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 RHOXF2Q9BQY4 288 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 FANCEQ9HB96 536 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 SYTL2Q9HCH5 934 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 INTS7Q9NVH2 962 aaKnown RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 TMEM9Q9P0T7 183 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ICKQ9UPZ9 632 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 MED16Q9Y2X0 877 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 PCDHGA3Q9Y5H0 932 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ASXL3Q9C0F0 2248 aa14.2□□□□□ -0.14
LIMS3-205ENST00000487150 ZFC3H1O60293 1989 aaKnown RBP14.2□□□□□ -0.14
LIMS3-205ENST00000487150 KNTC1P50748 2209 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 EFCAB7A8K855 629 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 BTN3A1O00481 513 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 SLC16A5O15375 505 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 NVLO15381 856 aaKnown RBP14.19□□□□□ -0.14
LIMS3-205ENST00000487150 CHRM5P08912 532 aaPredicted RBP14.19□□□□□ -0.14
LIMS3-205ENST00000487150 POLR2CP19387 275 aaPredicted RBP14.19□□□□□ -0.14
LIMS3-205ENST00000487150 CDH3P22223 829 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 MCM3P25205 808 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 MPSTP25325 297 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 GPX6P59796 221 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 HSD11B2P80365 405 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 CYP4F3Q08477 520 aa14.19□□□□□ -0.14
LIMS3-205ENST00000487150 IL11RAQ14626 422 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms