RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	SOX2	P48431	317 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	GCLM	P48507	274 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	HARS2	P49590	506 aa	Known RBP	4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TKTL1	P51854	596 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RAD23B	P54727	409 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SLC8A3	P57103	927 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	YWHAG	P61981	247 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RPS14	P62263	151 aa	Known RBP	4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CCDC15	Q0P6D6	951 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CLCA4	Q14CN2	919 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TTC31	Q49AM3	519 aa	Predicted RBP	4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	MPP7	Q5T2T1	576 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	KRT39	Q6A163	491 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	LVRN	Q6Q4G3	990 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RFX8	Q6ZV50	586 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CHST9	Q7L1S5	443 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ADIPOR2	Q86V24	386 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	PIGZ	Q86VD9	579 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TMPRSS12	Q86WS5	348 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RFX6	Q8HWS3	928 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SCML4	Q8N228	414 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ZNF557	Q8N988	423 aa	Predicted RBP	4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SLC4A11	Q8NBS3	891 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	BCAS4	Q8TDM0	211 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TAS1R2	Q8TE23	839 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SORCS1	Q8WY21	1168 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	GOLGA1	Q92805	767 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	AZIN2	Q96A70	460 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	BIRC7	Q96CA5	298 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	BTBD1	Q9H0C5	482 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	LHX5	Q9H2C1	402 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SGK2	Q9HBY8	427 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TM9SF3	Q9HD45	589 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	PRSS16	Q9NQE7	514 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ZIM2	Q9NZV7	527 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CFAP45	Q9UL16	551 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SCML1	Q9UN30	329 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	HPSE	Q9Y251	543 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	HBS1L	Q9Y450	684 aa	Known RBP	4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	PCDHGA1	Q9Y5H4	931 aa		4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941	MUC22	E2RYF6	1773 aa	Predicted RBP	4.06	□□□□□ -1.76
SNRNP40-205	ENST00000486941		A0A1B0GTQ1	180 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941		A0A1W2PPC4	97 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	IFITM10	A6NMD0	228 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	EIF4E1B	A6NMX2	242 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	C10orf142	B7Z368	130 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	XPO1	O14980	1071 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	IRAK2	O43187	625 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	STX10	O60499	249 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	DNTT	P04053	509 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	IGHV4-34	P06331	123 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TRIM49	P0CI25	452 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TRIM49C	P0CI26	452 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TMEM225B	P0DP42	221 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	POLR2E	P19388	210 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RBL1	P28749	1068 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	P2RX3	P56373	397 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TXNL4A	P83876	142 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	MTA1	Q13330	715 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ACOX1	Q15067	660 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	EDRF1	Q3B7T1	1238 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	BSPRY	Q5W0U4	402 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ZNF776	Q68DI1	518 aa	Predicted RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CACUL1	Q86Y37	369 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	FMNL3	Q8IVF7	1028 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	UNC45B	Q8IWX7	931 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	FAM186B	Q8IYM0	893 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	GUF1	Q8N442	669 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	KDM1B	Q8NB78	822 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	LSM14A	Q8ND56	463 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	FBXL13	Q8NEE6	735 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	FIBIN	Q8TAL6	211 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SUN3	Q8TAQ9	357 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RNF139	Q8WU17	664 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SEMA4D	Q92854	862 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CCDC47	Q96A33	483 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TTC17	Q96AE7	1141 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SKA1	Q96BD8	255 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	LMLN	Q96KR4	655 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ULBP1	Q9BZM6	244 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	FAM83D	Q9H4H8	585 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	LRRC4	Q9HBW1	653 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CNGB3	Q9NQW8	809 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	CISH	Q9NSE2	258 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ABCC13	Q9NSE7	274 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ABHD10	Q9NUJ1	306 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ABCB8	Q9NUT2	735 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	ARL8B	Q9NVJ2	186 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	RAB20	Q9NX57	234 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	DDX56	Q9NY93	547 aa	Known RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	GGA2	Q9UJY4	613 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	KIAA1257	Q9ULG3	409 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	VPS4A	Q9UN37	437 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	NCKAP1	Q9Y2A7	1128 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	COQ4	Q9Y3A0	265 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	SLCO1B1	Q9Y6L6	691 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	TRPM6	Q9BX84	2022 aa		4.05	□□□□□ -1.76
SNRNP40-205	ENST00000486941	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.05	□□□□□ -1.76

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