RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 STC1P52823 247 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 LIPEQ05469 1076 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 MYLK3Q32MK0 819 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 LY6G5CQ5SRR4 150 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 CHMP1BQ7LBR1 199 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 PROSER1Q86XN7 944 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 MCFD2Q8NI22 146 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ZIC5Q96T25 663 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 TMEM245Q9H330 911 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ADGRE2Q9UHX3 823 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 GJD2Q9UKL4 321 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 COLEC10Q9Y6Z7 277 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 LEFTY2O00292 366 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 CCNDBP1O95273 360 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 TIMP1P01033 207 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 RB1P06400 928 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 TYRP14679 529 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ZNHIT3Q15649 155 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 MOGQ16653 247 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 NIPAL1Q6NVV3 410 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 FAM171BQ6P995 826 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 PRR23BQ6ZRT6 265 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 R3HCC1LQ7Z5L2 792 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 SCD5Q86SK9 330 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 TMEM135Q86UB9 458 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ZNF598Q86UK7 904 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 CDK20Q8IZL9 346 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 C2CD4AQ8NCU7 369 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ZFP28Q8NHY6 868 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 EEF1AKMT1Q8WVE0 214 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 KLK6Q92876 244 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 PSKH2Q96QS6 385 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 YTHDF1Q9BYJ9 559 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 WDR6Q9NNW5 1121 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 TMEM9Q9P0T7 183 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 GON4LQ3T8J9 2241 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 SAGE2PA6NJ88 616 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 OR10H2O60403 315 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 UMPSP11172 480 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 IL4RP24394 825 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 AQP1P29972 269 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 CCR10P46092 362 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 CDH15P55291 814 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 MERTKQ12866 999 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 TLR1Q15399 786 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 PM20D1Q6GTS8 502 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 THOC7Q6I9Y2 204 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ANKRD46Q86W74 232 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 PHTF2Q8N3S3 785 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 C12orf43Q96C57 262 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ROPN1LQ96C74 230 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 CLIP3Q96DZ5 547 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 OR2AG1Q9H205 316 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 LIN28AQ9H9Z2 209 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 ZDHHC3Q9NYG2 299 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 MAGEL2Q9UJ55 1249 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 VPS4AQ9UN37 437 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 DGKBQ9Y6T7 804 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 FAM149AA5PLN7 773 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 KERAO60938 352 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 BCAS2O75934 225 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 STC2O76061 302 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 PAPSS2O95340 614 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 CFIP05156 583 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 SSR2P43308 183 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 LRRC32Q14392 662 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 SF1Q15637 639 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 FAM91A1Q658Y4 838 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 PRR11Q96HE9 360 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 BIRC8Q96P09 236 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 RIOK2Q9BVS4 552 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 NUSAP1Q9BXS6 441 aaKnown RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 GPN3Q9UHW5 284 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-228ENST00000486227 U3KQV3 271 aa10.82□□□□□ -0.68
HDAC6-228ENST00000486227 SNTNA6NMZ2 147 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 RHPN2P1A8MT19 583 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 K7EPI3 171 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 C8GP07360 202 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 ANXA4P09525 319 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-228ENST00000486227 CKMT2P17540 419 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 BNIP3Q12983 259 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 CCNIQ14094 377 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 TNFAIP8L3Q5GJ75 292 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 CEP78Q5JTW2 689 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 EOGTQ5NDL2 527 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 TRNP1Q6NT89 227 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 PARGQ86W56 976 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 HID1Q8IV36 788 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 OFCC1Q8IZS5 231 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 OVCA2Q8WZ82 227 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 EPB41L1Q9H4G0 881 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 SCN9AQ15858 1988 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 PIPSLA2A3N6 862 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 WNT9AO14904 365 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 TEX28O15482 410 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 DHPSP49366 369 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-228ENST00000486227 TPTEP56180 551 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 PLEKHG6Q3KR16 790 aa10.81□□□□□ -0.68
HDAC6-228ENST00000486227 ANXA8L1Q5VT79 327 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms