RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CAPN8A6NHC0 703 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 TCP11X1B4DZS4 312 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 F5H423 210 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 KLF11O14901 512 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 AURKAO14965 403 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 BIRC5O15392 142 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 NKX2-8O15522 239 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 GLRA3O75311 464 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 SPAG7O75391 227 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 MTX2O75431 263 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 RFPL1O75677 317 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 KIAA0754O94854 1291 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC4A1P02730 911 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF8P17098 575 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 TAC1P20366 129 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 GPR3P46089 330 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 PPM1FP49593 454 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 GFERP55789 205 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 KHDC1Q4VXA5 237 aaKnown RBP9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 HENMT1Q5T8I9 393 aaKnown RBP9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 ATP1A1-AS1Q5TC04 95 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 KIAA0930Q6ICG6 404 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 TMEM71Q6P5X7 295 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 IYDQ6PHW0 289 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 KIAA0408Q6ZU52 694 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 CCDC91Q7Z6B0 441 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 GALNT7Q86SF2 657 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 KCNMB4Q86W47 210 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 GALNT13Q8IUC8 556 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 CNTN4Q8IWV2 1026 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 LRRC34Q8IZ02 419 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 NRSN1Q8IZ57 195 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 SFRP1Q8N474 314 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 GPR26Q8NDV2 337 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 SPATA22Q8NHS9 363 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 TCP10LQ8TDR4 215 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 NCSTNQ92542 709 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 WNT2BQ93097 391 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 TMEM159Q96B96 161 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC38A3Q99624 504 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 RBBP8Q99708 897 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 ARHGAP9Q9BRR9 750 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 FAM167BQ9BTA0 163 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 SPRY4Q9C004 299 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 CDH19Q9H159 772 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 ATXN10Q9UBB4 475 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 TMPRSS11EQ9UL52 423 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 GRID1Q9ULK0 1009 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 PLLPQ9Y342 182 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 TCAF1Q9Y4C2 921 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 COL6A6A6NMZ7 2263 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 ANKRD66B4E2M5 251 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 HGSO14964 777 aaPredicted RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SNX3O60493 162 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 RAD1O60671 282 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PMPCBO75439 489 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 WISP1O95388 367 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 MT-CYBP00156 380 aaPredicted RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF30P17039 623 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 ETV4P43268 484 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 MAGEA12P43365 314 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 FASLGP48023 281 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SERPINB8P50452 374 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 CRADDP78560 199 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PDE1BQ01064 536 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 HHEXQ03014 270 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SQSTM1Q13501 440 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC1A5Q15758 541 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PCSK7Q16549 785 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 TEDDM1Q5T9Z0 273 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 CRTC3Q6UUV7 619 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 C6orf89Q6UWU4 347 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF765Q7L2R6 523 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 NLRP8Q86W28 1048 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 GBP7Q8N8V2 638 aaPredicted RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 AGBL5Q8NDL9 886 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 GDAP1Q8TB36 358 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF398Q8TD17 642 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 NAT14Q8WUY8 206 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 AHCYL2Q96HN2 611 aaKnown RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 TRIB3Q96RU7 358 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SRPK1Q96SB4 655 aaKnown RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PAIP2Q9BPZ3 127 aaKnown RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PITPNM3Q9BZ71 974 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 OR2AG1Q9H205 316 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 FAM83DQ9H4H8 585 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 BPIFA1Q9NP55 256 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 TREX1Q9NSU2 369 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 C20orf96Q9NUD7 363 aaPredicted RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 KCTD5Q9NXV2 234 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PDP2Q9P2J9 529 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 IL17BQ9UHF5 180 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 MID2Q9UJV3 735 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 ARL2BPQ9Y2Y0 163 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PCDHB11Q9Y5F2 797 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 PCDHGA3Q9Y5H0 932 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SPO11Q9Y5K1 396 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms