RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	NUDT13	Q86X67	352 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	SFR1	Q86XK3	245 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	CARNMT1	Q8N4J0	409 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	ATAD1	Q8NBU5	361 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	RNF128	Q8TEB7	428 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	SSMEM1	Q8WWF3	244 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	CENPT	Q96BT3	561 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	OTUB1	Q96FW1	271 aa	Predicted RBP	3.87	□□□□□ -1.79
FN1-222	ENST00000485567	KATNB1	Q9BVA0	655 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	MRPL9	Q9BYD2	267 aa	Known RBP	3.87	□□□□□ -1.79
FN1-222	ENST00000485567	VN1R1	Q9GZP7	353 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	EBF2	Q9HAK2	575 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567		Q9N2K0	584 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	SERINC1	Q9NRX5	453 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	B3GAT1	Q9P2W7	334 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	LRWD1	Q9UFC0	647 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	POU2F3	Q9UKI9	436 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	RABL2B	Q9UNT1	228 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	SPIN1	Q9Y657	262 aa	Predicted RBP	3.87	□□□□□ -1.79
FN1-222	ENST00000485567	SYNRG	Q9UMZ2	1314 aa		3.87	□□□□□ -1.79
FN1-222	ENST00000485567	HYKK	A2RU49	373 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	AP5Z1	O43299	807 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	RNASEH1	O60930	286 aa	Known RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	MOCS3	O95396	460 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	BAG2	O95816	211 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	VIM	P08670	466 aa	Known RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	GNAZ	P19086	355 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	ACAT1	P24752	427 aa	Known RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	TKT	P29401	623 aa	Known RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	MAPK12	P53778	367 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	DLK1	P80370	383 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	MAT1A	Q00266	395 aa	Known RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	YWHAH	Q04917	246 aa	Predicted RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	GAGE5	Q13069	117 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	GAGE6	Q13070	117 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	PRKAA1	Q13131	559 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	CUL3	Q13618	768 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	ITGA7	Q13683	1181 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	SLMAP	Q14BN4	828 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	SF3B4	Q15427	424 aa	Known RBP eCLIP	3.86	□□□□□ -1.79	4e-8	■■■■■ 46.3
FN1-222	ENST00000485567	KIF19	Q2TAC6	998 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	ZNF260	Q3ZCT1	412 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	ASPRV1	Q53RT3	343 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	SYT14P1	Q58G82	188 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	AWAT2	Q6E213	333 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	IYD	Q6PHW0	289 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	RAD9B	Q6WBX8	426 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	C15orf39	Q6ZRI6	1047 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	CREB3L2	Q70SY1	520 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	CCDC91	Q7Z6B0	441 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	C4orf19	Q8IY42	314 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	NUP93	Q8N1F7	819 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	LILRB1	Q8NHL6	650 aa	Predicted RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	FIBIN	Q8TAL6	211 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	MGARP	Q8TDB4	240 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	RTP4	Q96DX8	246 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	ADGRG7	Q96K78	797 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	INTS14	Q96SY0	518 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	TMEM204	Q9BSN7	226 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	FUT8	Q9BYC5	575 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	KRTAP4-2	Q9BYR5	136 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	CDH20	Q9HBT6	801 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	ERAP1	Q9NZ08	941 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	TBK1	Q9UHD2	729 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	RALY	Q9UKM9	306 aa	Known RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	PA2G4	Q9UQ80	394 aa	Known RBP	3.86	□□□□□ -1.79
FN1-222	ENST00000485567	GPRASP1	Q5JY77	1395 aa		3.86	□□□□□ -1.79
FN1-222	ENST00000485567	IGHV4OR15-8	A0A075B7B6	117 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567		A0A0U1RQK1	487 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ZNF320	A2RRD8	509 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ASPDH	A6ND91	283 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	RTCA	O00442	366 aa	Known RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	FMO6P	O60774	539 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	LIPF	P07098	398 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	INHBA	P08476	426 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	CDH1	P12830	882 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ATP6V1B1	P15313	513 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	TCF4	P15884	667 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	EPCAM	P16422	314 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	TIA1	P31483	386 aa	Known RBP eCLIP	3.85	□□□□□ -1.79	2e-8	■□□□□ 9.4
FN1-222	ENST00000485567	KIF5B	P33176	963 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	HSD17B3	P37058	310 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	PEX19	P40855	299 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	IL15	P40933	162 aa	Predicted RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	PRKCI	P41743	596 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	CRKL	P46109	303 aa	Known RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ZNF132	P52740	706 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	LINC00205	P59089	165 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	RPL24	P83731	157 aa	Known RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ZBTB17	Q13105	803 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	MFAP5	Q13361	173 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	SNTA1	Q13424	505 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	MORF4L2	Q15014	288 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	PTPN14	Q15678	1187 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ANKRD20A4	Q4UJ75	823 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ANKRD20A8P	Q5CZ79	823 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ANKRD20A2	Q5SQ80	823 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ANKRD20A1	Q5TYW2	823 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ANKRD20A3	Q5VUR7	823 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	NOTUM	Q6P988	496 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms