RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 RGSL1A5PLK6 1076 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 WIPF3A6NGB9 483 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 FAM159BA6NKW6 160 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 C2orf81A6NN90 581 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 NEDD8-MDP1E9PL57 170 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 J3KR12 359 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TM9SF1O15321 606 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PRPF4O43172 522 aaKnown RBP eCLIP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SLC7A4O43246 635 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TSPAN3O60637 253 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PMPCBO75439 489 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ZMPSTE24O75844 475 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SNUPNO95149 360 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PRAMEF12O95522 483 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 POP4O95707 220 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 GPANK1O95872 356 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SYF2O95926 243 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SNRPAP09012 282 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 DLDP09622 509 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 GLULP15104 373 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PSMC3P17980 439 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PSMA3P25788 255 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 HSD3B2P26439 372 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SPRP35270 261 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 GP5P40197 560 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CSKP41240 450 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CCR2P41597 374 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CD86P42081 329 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 KPNA2P52292 529 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 LGALS4P56470 323 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ST8SIA6P61647 398 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ARF5P84085 180 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 BCL2L1Q07817 233 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 LMAN2Q12907 356 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 THOC5Q13769 683 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 DHCR24Q15392 516 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TCEA2Q15560 299 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SEPT7Q16181 437 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CYP2A13Q16696 494 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SLC5A9Q2M3M2 681 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ANKRD20A4Q4UJ75 823 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TNFAIP8L3Q5GJ75 292 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 FAM78AQ5JUQ0 283 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 RARS2Q5T160 578 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 STXBP5Q5T5C0 1151 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ARMC12Q5T9G4 340 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 GRTP1Q5TC63 336 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 FAXCQ5TGI0 409 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 LYPLAL1Q5VWZ2 237 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SDE2Q6IQ49 451 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 MRNIPQ6NTE8 343 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 BRAT1Q6PJG6 821 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 AFTPHQ6ULP2 937 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TIFABQ6ZNK6 161 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 USP45Q70EL2 814 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 GET4Q7L5D6 327 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TRMT11Q7Z4G4 463 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 KIAA0907Q7Z7F0 614 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ADGRD2Q7Z7M1 963 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 SDCCAG8Q86SQ7 713 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 RBM23Q86U06 439 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PRPF39Q86UA1 669 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 MFSD6LQ8IWD5 586 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CNTN4Q8IWV2 1026 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 KIRREL3Q8IZU9 778 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 STK40Q8N2I9 435 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 OR2AP1Q8NGE2 309 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 OR52K1Q8NGK4 314 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ARRDC2Q8TBH0 407 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 DTX3LQ8TDB6 740 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 BRSK1Q8TDC3 778 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 STYXQ8WUJ0 223 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CENPTQ96BT3 561 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TLCD1Q96CP7 247 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TCEAL4Q96EI5 215 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 ALG14Q96F25 216 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CERS2Q96G23 380 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CFAP36Q96G28 342 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 OXNAD1Q96HP4 312 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PPP1R16AQ96I34 528 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 UHRF1Q96T88 793 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PAFAH2Q99487 392 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 MLPHQ9BV36 600 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 FICDQ9BVA6 458 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 TDRD1Q9BXT4 1180 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 IQCGQ9H095 443 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 CENPHQ9H3R5 247 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 C10orf88Q9H8K7 445 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 MAGEE1Q9HCI5 957 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PPANQ9NQ55 473 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 HCFC1R1Q9NWW0 138 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 DEC1Q9P2X7 70 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 DKK3Q9UBP4 350 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 MID2Q9UJV3 735 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PLA2G4CQ9UP65 541 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 PKP3Q9Y446 797 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 COMMD10Q9Y6G5 202 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.27□□□□□ -1.73
SPTA1-206ENST00000484520 RPS6KL1Q9Y6S9 549 aa4.27□□□□□ -1.73
SPTA1-206ENST00000484520 MYH10P35580 1976 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms